Variant report

No.	Distal block	Cell Line	Cell type
1	chr11:73303459..73306739-chr11:73310819..73313013,3	K562	blood:
2	chr11:73309644..73312561-chr11:73314444..73315980,2	MCF-7	breast:
3	chr11:73304614..73306739-chr11:73310819..73312531,2	K562	blood:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10898919	1.00[EUR][1000 genomes]
rs11235738	1.00[EUR][1000 genomes]
rs11235740	1.00[EUR][1000 genomes]
rs11235745	1.00[EUR][1000 genomes]
rs11235759	1.00[EUR][1000 genomes]
rs11235775	1.00[EUR][1000 genomes]
rs11235778	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11235779	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11825028	0.89[ASN][1000 genomes]
rs12269884	1.00[EUR][1000 genomes]
rs12274589	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12282790	1.00[EUR][1000 genomes]
rs12282871	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12288934	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12290835	1.00[EUR][1000 genomes]
rs12293596	1.00[EUR][1000 genomes]
rs13328886	1.00[EUR][1000 genomes]
rs3825005	1.00[EUR][1000 genomes]
rs56721062	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs57181830	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs57536508	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs59809325	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59991976	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60038108	1.00[EUR][1000 genomes]
rs60123349	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60349984	1.00[EUR][1000 genomes]
rs60920919	1.00[ASN][1000 genomes]
rs61613696	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9888198	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9971494	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3395161	chr11:73084616-73461577	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv530624	chr11:73114283-73646329	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
3	nsv492091	chr11:73285970-73844424	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	85 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:73310000-73317600	Weak transcription	Spleen	Spleen
2	chr11:73310400-73313000	Weak transcription	Right Ventricle	heart
3	chr11:73310400-73315800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr11:73312200-73312600	Enhancers	Psoas Muscle	Psoas
5	chr11:73312200-73312800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
6	chr11:73312200-73312800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle

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