The 2.0 version of rSNPBase

Variant report

Variant rs61405952
Chromosome Location chr15:41082633-41082634
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:41067600-41085400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr15:41068000-41087800 Weak transcription Fetal Heart heart
3 chr15:41072400-41083400 Weak transcription Fetal Muscle Trunk muscle
4 chr15:41072400-41090200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr15:41072600-41084000 Weak transcription Brain Germinal Matrix brain
6 chr15:41072600-41098600 Weak transcription Fetal Brain Female brain
7 chr15:41072600-41098600 Weak transcription Rectal Smooth Muscle rectum
8 chr15:41072800-41084200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr15:41077800-41082800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
10 chr15:41078200-41098600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr15:41079600-41098800 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr15:41080000-41084000 Weak transcription Stomach Smooth Muscle stomach
13 chr15:41080000-41089200 Weak transcription Colon Smooth Muscle Colon
14 chr15:41080000-41090400 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr15:41080000-41094600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr15:41080000-41099000 Weak transcription Aorta Aorta
17 chr15:41080200-41082800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr15:41080200-41083200 Enhancers HUES6 Cell Line embryonic stem cell
19 chr15:41080200-41084200 Weak transcription Adipose Nuclei Adipose
20 chr15:41080200-41085600 Weak transcription Brain Cingulate Gyrus brain
21 chr15:41080200-41085600 Weak transcription HSMMtube muscle
22 chr15:41080400-41082800 Weak transcription Primary hematopoietic stem cells blood
23 chr15:41080400-41082800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr15:41080400-41082800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr15:41080400-41082800 Weak transcription NH-A brain
26 chr15:41080400-41082800 Weak transcription Osteobl bone
27 chr15:41080400-41083000 Weak transcription Thymus Thymus
28 chr15:41080400-41083400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr15:41080400-41083800 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr15:41080400-41084200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr15:41080400-41085400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr15:41080400-41085400 Weak transcription Primary T cells from cord blood blood
33 chr15:41080400-41085600 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr15:41080400-41085600 Weak transcription Brain Hippocampus Middle brain
35 chr15:41080400-41085600 Weak transcription NHDF-Ad bronchial
36 chr15:41080400-41085600 Weak transcription NHLF lung
37 chr15:41080400-41085800 Weak transcription Brain Substantia Nigra brain
38 chr15:41080400-41093000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr15:41080400-41098200 Weak transcription GM12878-XiMat blood
40 chr15:41080400-41098600 Weak transcription Placenta Amnion Placenta Amnion
41 chr15:41080400-41098800 Weak transcription Brain Angular Gyrus brain
42 chr15:41080400-41098800 Weak transcription Brain Anterior Caudate brain
43 chr15:41080600-41082800 Weak transcription Muscle Satellite Cultured Cells --
44 chr15:41080600-41082800 Weak transcription Fetal Intestine Large intestine
45 chr15:41080600-41082800 Weak transcription HSMM muscle
46 chr15:41080600-41083000 Weak transcription HUVEC blood vessel
47 chr15:41080600-41084000 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr15:41080600-41084000 Weak transcription Placenta Placenta
49 chr15:41080600-41084400 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr15:41080600-41085600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015