Variant report

Variant	rs61678005
Chromosome Location	chr16:30933804-30933805
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	JUND	chr16:30933591-30934373	A549	lung:	n/a	n/a
2	YY1	chr16:30932864-30934987	GM12892	blood:	n/a	chr16:30933963-30933971 chr16:30934069-30934083 chr16:30934055-30934074 chr16:30934368-30934387 chr16:30934548-30934556 chr16:30934244-30934252 chr16:30933960-30933970 chr16:30934371-30934379 chr16:30934057-30934079 chr16:30934803-30934812 chr16:30933960-30933982 chr16:30934373-30934381 chr16:30934370-30934380 chr16:30934058-30934066 chr16:30934057-30934067 chr16:30934060-30934068 chr16:30934543-30934562
3	EGR1	chr16:30933433-30935051	HCT-116	colon:	n/a	chr16:30934312-30934336 chr16:30934618-30934642 chr16:30934732-30934756 chr16:30934798-30934811 chr16:30934132-30934156 chr16:30933769-30933793 chr16:30933915-30933939 chr16:30934773-30934787
4	POLR2A	chr16:30933399-30934865	HUVEC	blood vessel:	n/a	n/a
5	POLR2A	chr16:30933745-30934311	HepG2	liver:	n/a	n/a
6	HA-E2F1	chr16:30933556-30934429	MCF-7	breast:	n/a	chr16:30933775-30933787 chr16:30933776-30933783 chr16:30933776-30933783 chr16:30933776-30933783 chr16:30933775-30933784
7	SP1	chr16:30933188-30935038	A549	lung:	n/a	chr16:30934799-30934813 chr16:30933423-30933432 chr16:30933574-30933584 chr16:30934786-30934800 chr16:30934076-30934085 chr16:30934804-30934813 chr16:30934803-30934813 chr16:30934075-30934087 chr16:30933574-30933583 chr16:30934076-30934086 chr16:30933574-30933584 chr16:30934803-30934813 chr16:30934077-30934086 chr16:30934802-30934814 chr16:30934802-30934814 chr16:30934804-30934813 chr16:30934792-30934806 chr16:30934075-30934087 chr16:30933423-30933432 chr16:30934076-30934085 chr16:30934803-30934812 chr16:30933422-30933431
8	FOS	chr16:30933718-30934207	MCF10A-Er-Src	breast:	n/a	n/a
9	ZBTB7A	chr16:30933802-30934265	K562	blood:	n/a	n/a
10	PML	chr16:30933499-30934744	K562	blood:	n/a	n/a
11	ZBTB33	chr16:30933627-30934110	GM12878	blood:	n/a	n/a
12	POLR2A	chr16:30932994-30934754	IMR90	lung:	n/a	n/a
13	MAX	chr16:30932857-30934906	H1-hESC	embryonic stem cell:	n/a	n/a
14	MXI1	chr16:30932916-30934862	HepG2	liver:	n/a	n/a
15	RELA	chr16:30933730-30934835	GM10847	blood:	n/a	n/a
16	GABPA	chr16:30932930-30935065	MCF-7	breast:	n/a	chr16:30933932-30933946 chr16:30934803-30934812
17	CEBPB	chr16:30933701-30934776	IMR90	lung:	n/a	n/a
18	TAF1	chr16:30933665-30934925	K562	blood:	n/a	n/a
19	NR2F2	chr16:30933640-30934298	MCF-7	breast:	n/a	chr16:30933942-30933957
20	USF1	chr16:30933656-30934866	SK-N-SH	brain:	n/a	n/a
21	CEBPB	chr16:30933769-30933996	HepG2	liver:	n/a	n/a
22	NR2C2	chr16:30933666-30934840	HepG2	liver:	n/a	chr16:30933942-30933957
23	ETS1	chr16:30933289-30935121	A549	lung:	n/a	chr16:30934732-30934745 chr16:30933915-30933928 chr16:30934668-30934681 chr16:30933914-30933927 chr16:30934131-30934144 chr16:30934018-30934031 chr16:30934731-30934744 chr16:30934736-30934743 chr16:30933768-30933781 chr16:30934019-30934032 chr16:30934312-30934325
24	TRIM28	chr16:30933545-30934804	K562	blood:	n/a	n/a
25	POLR2A	chr16:30932820-30935110	PANC-1	pancreas:	n/a	n/a
26	SP1	chr16:30933409-30934957	H1-hESC	embryonic stem cell:	n/a	chr16:30934799-30934813 chr16:30933423-30933432 chr16:30933574-30933584 chr16:30934786-30934800 chr16:30934076-30934085 chr16:30934804-30934813 chr16:30934803-30934813 chr16:30934075-30934087 chr16:30933574-30933583 chr16:30934076-30934086 chr16:30933574-30933584 chr16:30934803-30934813 chr16:30934077-30934086 chr16:30934802-30934814 chr16:30934802-30934814 chr16:30934804-30934813 chr16:30934792-30934806 chr16:30934075-30934087 chr16:30933423-30933432 chr16:30934076-30934085 chr16:30934803-30934812 chr16:30933422-30933431
27	CREB1	chr16:30933489-30934232	ECC-1	luminal epithelium:	n/a	n/a
28	POLR2A	chr16:30933503-30934759	MCF10A-Er-Src	breast:	n/a	n/a
29	TCF12	chr16:30933371-30934414	A549	lung:	n/a	n/a
30	MTA3	chr16:30933166-30933959	GM12878	blood:	n/a	n/a
31	ELF1	chr16:30933590-30934887	A549	lung:	n/a	n/a
32	SP1	chr16:30933595-30934932	GM12878	blood:	n/a	chr16:30934799-30934813 chr16:30934786-30934800 chr16:30934076-30934085 chr16:30934804-30934813 chr16:30934803-30934813 chr16:30934075-30934087 chr16:30934076-30934086 chr16:30934803-30934813 chr16:30934077-30934086 chr16:30934802-30934814 chr16:30934802-30934814 chr16:30934804-30934813 chr16:30934792-30934806 chr16:30934075-30934087 chr16:30934076-30934085 chr16:30934803-30934812
33	CEBPB	chr16:30933726-30934753	HepG2	liver:	n/a	n/a
34	ATF3	chr16:30933732-30933996	GM12878	blood:	n/a	n/a
35	GABPA	chr16:30933340-30934868	A549	lung:	n/a	chr16:30933932-30933946 chr16:30934803-30934812
36	BRCA1	chr16:30933622-30934795	Hela-S3	cervix:	n/a	n/a
37	POLR2A	chr16:30933584-30934770	GM12892	blood:	n/a	n/a
38	POLR2A	chr16:30932733-30935154	HepG2	liver:	n/a	n/a
39	TBP	chr16:30933509-30934851	K562	blood:	n/a	n/a
40	GABPA	chr16:30933556-30934068	H1-hESC	embryonic stem cell:	n/a	chr16:30933932-30933946
41	STAT3	chr16:30933504-30933859	MCF10A-Er-Src	breast:	n/a	chr16:30933698-30933710
42	RFX5	chr16:30933751-30934729	GM12878	blood:	n/a	chr16:30933838-30933851
43	ELK1	chr16:30933431-30934795	Hela-S3	cervix:	n/a	n/a
44	ATF3	chr16:30933614-30934106	H1-hESC	embryonic stem cell:	n/a	n/a
45	POLR2A	chr16:30932808-30935284	H1-hESC	embryonic stem cell:	n/a	n/a
46	MYC	chr16:30933797-30934818	MCF-7	breast:	n/a	n/a
47	POLR2A	chr16:30933718-30934623	HepG2	liver:	n/a	n/a
48	RUNX3	chr16:30933576-30934939	GM12878	blood:	n/a	n/a
49	POLR2A	chr16:30932910-30935253	HUVEC	blood vessel:	n/a	n/a
50	POLR2A	chr16:30932904-30934842	Hela-S3	cervix:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr16:30749500..30754511-chr16:30932304..30935822,6	MCF-7	breast:
2	chr1:156698589..156699364-chr16:30933347..30934094,2	Hela-S3	cervix:
3	chr16:30775945..30778308-chr16:30932961..30936468,4	MCF-7	breast:
4	chr16:30708299..30711208-chr16:30931702..30936734,5	MCF-7	breast:
5	chr16:30885123..30887354-chr16:30932881..30934600,2	K562	blood:
6	chr16:30902291..30910124-chr16:30929571..30937617,16	K562	blood:
7	chr16:30903642..30909138-chr16:30932304..30936727,12	MCF-7	breast:
8	chr16:30885239..30889762-chr16:30932057..30936596,5	K562	blood:
9	chr16:30933224..30936181-chr16:31190353..31192929,3	MCF-7	breast:
10	chr16:30795105..30800041-chr16:30931976..30937405,9	MCF-7	breast:
11	chr16:30666829..30670641-chr16:30932372..30935048,3	K562	blood:
12	chr16:30758359..30761183-chr16:30932981..30935164,3	MCF-7	breast:
13	chr16:30931053..30936697-chr16:30966530..30971104,6	MCF-7	breast:
14	chr16:30902664..30909579-chr16:30931454..30940613,20	MCF-7	breast:
15	chr16:30933650..30935659-chr16:30958859..30961099,3	MCF-7	breast:
16	chr16:30783772..30791593-chr16:30931071..30936822,9	MCF-7	breast:
17	chr16:30933762..30935434-chr16:30953363..30955421,2	K562	blood:
18	chr16:30933684..30934271-chr17:73775388..73775888,2	Hela-S3	cervix:
19	chr16:30666829..30669508-chr16:30932265..30935039,3	K562	blood:
20	chr16:30771138..30775135-chr16:30932116..30935546,5	K562	blood:
21	chr16:30785189..30790485-chr16:30931540..30935208,7	K562	blood:
22	chr16:30673165..30675220-chr16:30931528..30934026,3	MCF-7	breast:
23	chr16:30785189..30790485-chr16:30931540..30936077,12	K562	blood:
24	chr16:30773358..30775666-chr16:30933218..30935538,2	MCF-7	breast:
25	chr16:30708050..30711529-chr16:30932244..30936391,8	K562	blood:
26	chr16:30884320..30888249-chr16:30933469..30936807,5	MCF-7	breast:
27	chr16:30932570..30935399-chr16:30951570..30953747,3	MCF-7	breast:
28	chr16:30714231..30716333-chr16:30932436..30935145,3	MCF-7	breast:
29	chr16:30660621..30663069-chr16:30932117..30934352,2	MCF-7	breast:
30	chr16:30771064..30772842-chr16:30931594..30934541,3	MCF-7	breast:
31	chr16:30717638..30720384-chr16:30932355..30934222,2	K562	blood:
32	chr16:30708909..30711747-chr16:30932178..30935236,6	MCF-7	breast:
33	chr16:30757799..30759751-chr16:30933800..30935636,3	K562	blood:
34	chr16:30896338..30898892-chr16:30931663..30933817,2	MCF-7	breast:
35	chr16:30919055..30921667-chr16:30931962..30935622,4	K562	blood:
36	chr16:30932689..30934576-chr16:31084033..31085909,2	MCF-7	breast:
37	chr16:30669272..30672997-chr16:30933501..30936286,4	MCF-7	breast:
38	chr16:30885095..30888093-chr16:30931834..30934580,5	MCF-7	breast:
39	chr16:30932667..30934937-chr16:30952381..30954780,2	K562	blood:
40	chr16:30904584..30910124-chr16:30931578..30937019,11	K562	blood:
41	chr16:30932533..30936330-chr16:30966882..30969248,5	K562	blood:
42	chr16:30707963..30711732-chr16:30932569..30936139,6	K562	blood:
43	chr16:30757630..30759751-chr16:30932681..30935536,3	K562	blood:
44	chr16:30931099..30935683-chr16:30951173..30955369,5	MCF-7	breast:
45	chr16:30932022..30936181-chr16:30958194..30961985,7	K562	blood:
46	chr16:30795368..30800075-chr16:30931111..30935900,11	MCF-7	breast:
47	chr16:30932533..30935734-chr16:30966751..30970803,5	K562	blood:
48	chr11:34126726..34127246-chr16:30933771..30934555,2	NB4	blood:
49	chr16:30931619..30936181-chr16:30955998..30963201,14	K562	blood:
50	chr16:30784974..30791554-chr16:30930641..30936449,8	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-BCL7C-2	chr16:30930640-30934590	ENSG00000260852.1

Variant related genes	Relation type
FBXL19	TF binding region
ENSG00000211591	Chromatin interaction
ENSG00000132475	Chromatin interaction
ENSG00000099385	Chromatin interaction
ENSG00000156858	Chromatin interaction
ENSG00000175938	Chromatin interaction
ENSG00000260899	Chromatin interaction
ENSG00000150281	Chromatin interaction
ENSG00000167394	Chromatin interaction
ENSG00000261840	Chromatin interaction
ENSG00000265991	Chromatin interaction
ENSG00000156860	Chromatin interaction
ENSG00000143319	Chromatin interaction
ENSG00000099364	Chromatin interaction
ENSG00000080603	Chromatin interaction
ENSG00000156873	Chromatin interaction
ENSG00000261487	Chromatin interaction
ENSG00000102870	Chromatin interaction
ENSG00000196118	Chromatin interaction
ENSG00000262721	Chromatin interaction
ENSG00000260083	Chromatin interaction
ENSG00000099381	Chromatin interaction
ENSG00000135372	Chromatin interaction
ENSG00000262026	Chromatin interaction
ENSG00000089280	Chromatin interaction
ENSG00000103549	Chromatin interaction
ENSG00000143303	Chromatin interaction
ENSG00000167395	Chromatin interaction
ENSG00000230447	Chromatin interaction

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1348039	1.00[AMR][1000 genomes]
rs1470129	1.00[AMR][1000 genomes]
rs1530201	1.00[AMR][1000 genomes]
rs2919428	1.00[AMR][1000 genomes]
rs2972805	1.00[AMR][1000 genomes]
rs4889492	1.00[AMR][1000 genomes]
rs4889502	1.00[AMR][1000 genomes]
rs4889506	1.00[AMR][1000 genomes]
rs55775432	0.90[AFR][1000 genomes]
rs55821738	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56209628	0.81[AFR][1000 genomes]
rs57384499	0.81[AFR][1000 genomes]
rs58723456	1.00[AMR][1000 genomes]
rs62057229	1.00[AMR][1000 genomes]
rs6420450	1.00[AMR][1000 genomes]
rs7188927	1.00[AMR][1000 genomes]
rs74015053	0.81[AFR][1000 genomes]
rs74015054	1.00[AFR][1000 genomes]
rs74015056	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs893924	1.00[AMR][1000 genomes]
rs893925	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1062456	chr16:30442166-31253997	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	437 gene(s)	inside rSNPs	diseases
2	nsv542898	chr16:30442166-31253997	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	437 gene(s)	inside rSNPs	diseases
3	nsv1064134	chr16:30640293-31087327	Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	238 gene(s)	inside rSNPs	diseases
4	nsv905729	chr16:30642867-31247924	Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	387 gene(s)	inside rSNPs	diseases
5	esv1825223	chr16:30669091-30971810	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	191 gene(s)	inside rSNPs	diseases
6	nsv431451	chr16:30682399-31340999	Transcr. at gene 5' and 3' Genic enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	350 gene(s)	inside rSNPs	diseases
7	nsv905733	chr16:30796919-31004812	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	112 gene(s)	inside rSNPs	diseases
8	nsv869652	chr16:30799471-30951038	Bivalent Enhancer Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	70 gene(s)	inside rSNPs	diseases
9	nsv833189	chr16:30819708-30960795	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	79 gene(s)	inside rSNPs	diseases
10	nsv833190	chr16:30845051-31007863	Enhancers Genic enhancers Strong transcription Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
11	nsv833191	chr16:30864242-31048051	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	115 gene(s)	inside rSNPs	diseases
12	nsv905734	chr16:30877544-31191482	Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	271 gene(s)	inside rSNPs	diseases
13	nsv905735	chr16:30890538-31247924	Strong transcription Genic enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	264 gene(s)	inside rSNPs	diseases
14	nsv905736	chr16:30900235-30995528	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	83 gene(s)	inside rSNPs	diseases
15	nsv905737	chr16:30900235-31014179	Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	95 gene(s)	inside rSNPs	diseases
16	nsv457483	chr16:30903679-31191482	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	253 gene(s)	inside rSNPs	diseases
17	nsv571820	chr16:30903679-31191482	Enhancers Genic enhancers Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	253 gene(s)	inside rSNPs	diseases
18	nsv905738	chr16:30906274-30973926	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	76 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:30932200-30936600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr16:30932400-30934800	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr16:30932600-30936000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
4	chr16:30932800-30934600	Active TSS	NHDF-Ad	bronchial
5	chr16:30932800-30935000	Active TSS	Fetal Lung	lung
6	chr16:30932800-30935600	Active TSS	HUVEC	blood vessel
7	chr16:30932800-30935800	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr16:30932800-30935800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr16:30932800-30935800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr16:30932800-30935800	Active TSS	Brain Hippocampus Middle	brain
11	chr16:30932800-30935800	Active TSS	Pancreas	Pancrea
12	chr16:30932800-30935800	Active TSS	Rectal Smooth Muscle	rectum
13	chr16:30932800-30935800	Active TSS	Thymus	Thymus
14	chr16:30932800-30936000	Active TSS	Breast Myoepithelial Primary Cells	Breast
15	chr16:30932800-30936000	Active TSS	Brain Angular Gyrus	brain
16	chr16:30932800-30936000	Active TSS	Brain Cingulate Gyrus	brain
17	chr16:30932800-30936000	Active TSS	Duodenum Smooth Muscle	Duodenum
18	chr16:30932800-30936000	Active TSS	Fetal Brain Female	brain
19	chr16:30932800-30936000	Active TSS	Fetal Intestine Large	intestine
20	chr16:30932800-30936000	Active TSS	A549	lung
21	chr16:30932800-30936200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr16:30932800-30936200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr16:30932800-30936400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr16:30932800-30936400	Active TSS	Fetal Kidney	kidney
25	chr16:30932800-30936800	Active TSS	HUES48 Cell Line	embryonic stem cell
26	chr16:30932800-30936800	Active TSS	HUES64 Cell Line	embryonic stem cell
27	chr16:30932800-30936800	Active TSS	iPS-20b Cell Line	embryonic stem cell
28	chr16:30932800-30936800	Active TSS	HSMM	muscle
29	chr16:30932800-30937000	Active TSS	iPS-18 Cell Line	embryonic stem cell
30	chr16:30933000-30934000	Transcr. at gene 5' and 3'	Right Atrium	heart
31	chr16:30933000-30934600	Active TSS	ES-I3 Cell Line	embryonic stem cell
32	chr16:30933000-30935000	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
33	chr16:30933000-30935200	Active TSS	Brain Substantia Nigra	brain
34	chr16:30933000-30935400	Active TSS	Primary T cells from cord blood	blood
35	chr16:30933000-30935400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr16:30933000-30935600	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
37	chr16:30933000-30935600	Active TSS	Colonic Mucosa	Colon
38	chr16:30933000-30935600	Active TSS	Gastric	stomach
39	chr16:30933000-30935600	Active TSS	Psoas Muscle	Psoas
40	chr16:30933000-30935600	Active TSS	Right Ventricle	heart
41	chr16:30933000-30935600	Active TSS	Sigmoid Colon	Sigmoid Colon
42	chr16:30933000-30935800	Active TSS	Cortex derived primary cultured neurospheres	brain
43	chr16:30933000-30935800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
44	chr16:30933000-30935800	Active TSS	Aorta	Aorta
45	chr16:30933000-30935800	Active TSS	Colon Smooth Muscle	Colon
46	chr16:30933000-30935800	Active TSS	Small Intestine	intestine
47	chr16:30933000-30935800	Active TSS	NHEK	skin
48	chr16:30933000-30936000	Active TSS	Fetal Intestine Small	intestine
49	chr16:30933000-30936000	Active TSS	Fetal Stomach	stomach
50	chr16:30933000-30936000	Active TSS	Left Ventricle	heart

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links