Variant report

Variant rs6420450
Chromosome Location chr16:30886365-30886366
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:30885400-30887200 Active TSS Colonic Mucosa Colon
2 chr16:30885400-30887200 Active TSS Rectal Mucosa Donor 29 rectum
3 chr16:30885600-30886400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
4 chr16:30885600-30886400 Flanking Active TSS Primary hematopoietic stem cells blood
5 chr16:30885600-30886400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
6 chr16:30885600-30886400 Flanking Active TSS Placenta Placenta
7 chr16:30885600-30886600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
8 chr16:30885600-30886600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
9 chr16:30885600-30886600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr16:30885600-30886600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr16:30885600-30886600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
12 chr16:30885600-30886600 Flanking Active TSS Adipose Nuclei Adipose
13 chr16:30885600-30887000 Active TSS Osteobl bone
14 chr16:30885600-30887200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr16:30885600-30887200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr16:30885600-30887200 Active TSS Brain Anterior Caudate brain
17 chr16:30885600-30887200 Active TSS Rectal Smooth Muscle rectum
18 chr16:30885600-30887200 Active TSS Skeletal Muscle Female skeletal muscle
19 chr16:30885600-30887200 Active TSS NHLF lung
20 chr16:30885600-30887400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr16:30885600-30887400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr16:30885600-30887400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr16:30885600-30887400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr16:30885600-30887400 Active TSS Muscle Satellite Cultured Cells --
25 chr16:30885600-30887400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
26 chr16:30885600-30887400 Active TSS Esophagus oesophagus
27 chr16:30885600-30887400 Active TSS Fetal Brain Female brain
28 chr16:30885600-30887400 Active TSS Psoas Muscle Psoas
29 chr16:30885600-30887400 Active TSS A549 lung
30 chr16:30885600-30887400 Active TSS GM12878-XiMat blood
31 chr16:30885600-30887400 Active TSS HSMM muscle
32 chr16:30885600-30888200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr16:30885600-30888400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr16:30885600-30888400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
35 chr16:30885600-30888400 Active TSS Pancreatic Islets Pancreatic Islet
36 chr16:30885800-30886400 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
37 chr16:30885800-30886400 Active TSS Aorta Aorta
38 chr16:30885800-30886600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
39 chr16:30885800-30886600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
40 chr16:30885800-30886600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
41 chr16:30885800-30886600 Flanking Active TSS Primary T cells fromperipheralblood blood
42 chr16:30885800-30886600 Flanking Active TSS HMEC breast
43 chr16:30885800-30887200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr16:30885800-30887200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
45 chr16:30885800-30887200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr16:30885800-30887200 Active TSS Fetal Kidney kidney
47 chr16:30885800-30887200 Active TSS Stomach Smooth Muscle stomach
48 chr16:30885800-30887200 Active TSS NHDF-Ad bronchial
49 chr16:30885800-30887400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
50 chr16:30885800-30887400 Active TSS Primary T killer memory cells from peripheral blood blood

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