Variant report

Variant rs7188927
Chromosome Location chr16:30788297-30788298
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:30786200-30788400 Active TSS H9 Cell Line embryonic stem cell
2 chr16:30786200-30788400 Active TSS iPS-18 Cell Line embryonic stem cell
3 chr16:30786600-30788800 Active TSS Rectal Smooth Muscle rectum
4 chr16:30786800-30788400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
5 chr16:30787000-30788800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
6 chr16:30787400-30788600 Flanking Active TSS Duodenum Mucosa Duodenum
7 chr16:30787400-30788800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr16:30787400-30790400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
9 chr16:30787600-30788400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr16:30787600-30788400 Enhancers Primary neutrophils fromperipheralblood blood
11 chr16:30787600-30788400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr16:30787600-30788400 Enhancers Brain Germinal Matrix brain
13 chr16:30787600-30788400 Enhancers Placenta Amnion Placenta Amnion
14 chr16:30787600-30788600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr16:30787600-30789000 Enhancers Gastric stomach
16 chr16:30787600-30789200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr16:30787600-30789400 Enhancers Stomach Mucosa stomach
18 chr16:30787600-30793000 Weak transcription Esophagus oesophagus
19 chr16:30787600-30793400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr16:30787600-30797600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr16:30787800-30788400 Enhancers H1 Cell Line embryonic stem cell
22 chr16:30787800-30788400 Enhancers Primary T killer naive cells fromperipheralblood blood
23 chr16:30787800-30788400 Enhancers Placenta Placenta
24 chr16:30787800-30788400 Bivalent Enhancer Fetal Thymus thymus
25 chr16:30787800-30788400 Weak transcription HSMM muscle
26 chr16:30787800-30788600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr16:30787800-30788600 Enhancers Cortex derived primary cultured neurospheres brain
28 chr16:30787800-30788600 Enhancers Fetal Stomach stomach
29 chr16:30787800-30788600 Enhancers Lung lung
30 chr16:30787800-30788600 Enhancers NHDF-Ad bronchial
31 chr16:30787800-30788800 Enhancers Primary monocytes fromperipheralblood blood
32 chr16:30787800-30788800 Bivalent Enhancer Primary T cells fromperipheralblood blood
33 chr16:30787800-30788800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr16:30787800-30789000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr16:30787800-30789000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr16:30787800-30789000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
37 chr16:30787800-30789000 Enhancers NHLF lung
38 chr16:30787800-30789200 Enhancers Primary T killer memory cells from peripheral blood blood
39 chr16:30787800-30789400 Enhancers Liver Liver
40 chr16:30787800-30789400 Enhancers Ovary ovary
41 chr16:30787800-30789400 Enhancers Pancreas Pancrea
42 chr16:30787800-30789600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr16:30787800-30789800 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr16:30787800-30789800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr16:30787800-30789800 Enhancers Psoas Muscle Psoas
46 chr16:30787800-30790000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr16:30787800-30790400 Weak transcription Fetal Brain Female brain
48 chr16:30787800-30790400 Enhancers Right Ventricle heart
49 chr16:30787800-30790400 Enhancers HSMMtube muscle
50 chr16:30787800-30790600 Enhancers Adipose Nuclei Adipose

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