Variant report

Variant	rs61702433
Chromosome Location	chr7:117627585-117627586
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10230941	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10231973	0.87[ASN][1000 genomes]
rs10240110	0.87[ASN][1000 genomes]
rs10249457	0.87[ASN][1000 genomes]
rs10255829	0.87[ASN][1000 genomes]
rs10264984	0.98[ASN][1000 genomes]
rs10270826	0.98[ASN][1000 genomes]
rs10282032	0.98[ASN][1000 genomes]
rs13438629	0.87[ASN][1000 genomes]
rs17568511	0.98[ASN][1000 genomes]
rs17569137	0.87[ASN][1000 genomes]
rs2188836	0.87[ASN][1000 genomes]
rs2214230	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs739619	0.87[ASN][1000 genomes]
rs757038	0.87[ASN][1000 genomes]
rs8180706	0.87[ASN][1000 genomes]
rs8180812	0.87[ASN][1000 genomes]
rs970185	0.98[ASN][1000 genomes]
rs989996	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869971	chr7:117420583-118274149	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117623600-117632800	Weak transcription	Fetal Kidney	kidney

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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