The 2.0 version of rSNPBase

Variant report

Variant rs61734538
Chromosome Location chr1:159942618-159942619
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:159932000-159949800 Weak transcription Esophagus oesophagus
2 chr1:159933200-159947200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr1:159933400-159950600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:159937400-159947200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr1:159937600-159944000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr1:159938000-159943400 Enhancers Stomach Mucosa stomach
7 chr1:159938200-159943400 Enhancers Fetal Intestine Large intestine
8 chr1:159939000-159945200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:159940200-159947400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:159941000-159944600 Strong transcription NHEK skin
11 chr1:159941600-159957800 Weak transcription Right Atrium heart
12 chr1:159942000-159943200 Genic enhancers Fetal Intestine Small intestine
13 chr1:159942000-159951200 Weak transcription Gastric stomach
14 chr1:159942000-159951600 Weak transcription Pancreas Pancrea
15 chr1:159942200-159947200 Weak transcription Duodenum Mucosa Duodenum
16 chr1:159942200-159950000 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr1:159942200-159959400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:159942600-159942800 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr1:159942600-159943200 Strong transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015