The 2.0 version of rSNPBase

Variant report

Variant rs61828259
Chromosome Location chr1:211922355-211922356
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211909400-211939200 Weak transcription Ovary ovary
2 chr1:211909600-211922400 Weak transcription HSMM muscle
3 chr1:211909600-211923600 Weak transcription NHDF-Ad bronchial
4 chr1:211909600-211939400 Weak transcription Esophagus oesophagus
5 chr1:211911800-211927400 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:211912400-211925600 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr1:211912600-211964600 Weak transcription NHEK skin
8 chr1:211912800-211970200 Weak transcription HMEC breast
9 chr1:211913400-211922400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:211913800-211922400 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr1:211913800-211967800 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr1:211913800-211968800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:211913800-211969600 Weak transcription Small Intestine intestine
14 chr1:211914000-211949600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr1:211914000-211960400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr1:211914000-211965400 Weak transcription Thymus Thymus
17 chr1:211914000-211973600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr1:211914200-211947600 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr1:211914400-211925800 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr1:211915200-211923200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr1:211915800-211991800 Weak transcription Muscle Satellite Cultured Cells --
22 chr1:211916200-211965400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:211916600-211922400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr1:211916600-211922400 Weak transcription Fetal Thymus thymus
25 chr1:211916800-211994200 Weak transcription Fetal Brain Male brain
26 chr1:211917000-211925400 Strong transcription Liver Liver
27 chr1:211917000-211926400 Weak transcription K562 blood
28 chr1:211917000-211970400 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr1:211917600-211934800 Weak transcription Colon Smooth Muscle Colon
30 chr1:211917800-211922600 Weak transcription Fetal Kidney kidney
31 chr1:211918400-211925200 Weak transcription Stomach Mucosa stomach
32 chr1:211918800-211927200 Weak transcription Fetal Heart heart
33 chr1:211918800-211930800 Weak transcription Fetal Lung lung
34 chr1:211919000-211925400 Strong transcription Primary neutrophils fromperipheralblood blood
35 chr1:211919000-211931200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:211919200-212001200 Weak transcription Gastric stomach
37 chr1:211919400-211924400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:211919800-211926400 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr1:211920000-211924800 Strong transcription Adipose Nuclei Adipose
40 chr1:211920000-211928000 Strong transcription Primary monocytes fromperipheralblood blood
41 chr1:211920200-211922600 Strong transcription Osteobl bone
42 chr1:211920200-211923200 Strong transcription Fetal Intestine Large intestine
43 chr1:211920200-211923600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:211920200-211924000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:211920200-211924200 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr1:211920200-211924200 Strong transcription Duodenum Smooth Muscle Duodenum
47 chr1:211920200-211924200 Strong transcription Fetal Muscle Trunk muscle
48 chr1:211920200-211924400 Strong transcription Fetal Muscle Leg muscle
49 chr1:211920200-211925000 Strong transcription Primary hematopoietic stem cells blood
50 chr1:211920200-211927800 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015