The 2.0 version of rSNPBase

Variant report

Variant rs61852496
Chromosome Location chr10:90286871-90286872
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:90283800-90288800 Weak transcription Fetal Lung lung
2 chr10:90284000-90288000 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr10:90285000-90287000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr10:90285600-90287000 Enhancers Thymus Thymus
5 chr10:90285600-90287600 Enhancers Fetal Thymus thymus
6 chr10:90285800-90289800 Weak transcription HSMM muscle
7 chr10:90286000-90290000 Enhancers Muscle Satellite Cultured Cells --
8 chr10:90286000-90290800 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr10:90286000-90291200 Weak transcription Duodenum Mucosa Duodenum
10 chr10:90286200-90291200 Weak transcription Liver Liver
11 chr10:90286400-90287000 Enhancers HUES6 Cell Line embryonic stem cell
12 chr10:90286400-90288200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr10:90286600-90288000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr10:90286800-90287200 Enhancers H1 Cell Line embryonic stem cell
15 chr10:90286800-90287200 Enhancers iPS-15b Cell Line embryonic stem cell
16 chr10:90286800-90287200 Enhancers iPS-18 Cell Line embryonic stem cell
17 chr10:90286800-90287600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
18 chr10:90286800-90287600 Enhancers Hela-S3 cervix

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Last update: Aug 31, 2015