Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11177072	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11177073	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11503734	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12302207	0.82[AFR][1000 genomes]
rs12306852	0.89[EUR][1000 genomes]
rs12307587	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12308338	0.89[EUR][1000 genomes]
rs12310687	0.89[EUR][1000 genomes]
rs12313843	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12318069	0.89[EUR][1000 genomes]
rs12320174	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12321504	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12321565	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs55881326	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs56408274	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs60017528	0.88[EUR][1000 genomes]
rs60079212	0.89[EUR][1000 genomes]
rs61923089	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61923118	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61923119	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7959900	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1847952	chr12:68544896-68693242	Flanking Active TSS Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:68570400-68576200	Enhancers	Primary T cells from cord blood	blood
2	chr12:68574200-68576200	Enhancers	Primary T cells fromperipheralblood	blood
3	chr12:68574400-68576200	Enhancers	Fetal Thymus	thymus
4	chr12:68575200-68576400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr12:68575400-68576200	Enhancers	Primary T helper naive cells fromperipheralblood	blood

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