Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1016637	1.00[ASN][1000 genomes]
rs10484167	1.00[ASN][1000 genomes]
rs11622799	1.00[ASN][1000 genomes]
rs11627513	1.00[ASN][1000 genomes]
rs1385551	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1683119	1.00[ASN][1000 genomes]
rs1683147	1.00[ASN][1000 genomes]
rs17191520	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17686657	1.00[ASN][1000 genomes]
rs17689806	1.00[ASN][1000 genomes]
rs17761028	1.00[ASN][1000 genomes]
rs1884065	1.00[ASN][1000 genomes]
rs1950268	1.00[ASN][1000 genomes]
rs1950269	1.00[ASN][1000 genomes]
rs1955579	1.00[ASN][1000 genomes]
rs1955581	1.00[ASN][1000 genomes]
rs2017852	1.00[ASN][1000 genomes]
rs2887582	1.00[ASN][1000 genomes]
rs5008068	1.00[ASN][1000 genomes]
rs61981037	0.92[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs710263	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7147186	1.00[ASN][1000 genomes]
rs7154859	1.00[ASN][1000 genomes]
rs8018103	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs856245	1.00[ASN][1000 genomes]
rs856248	1.00[ASN][1000 genomes]
rs856268	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs957995	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044202	chr14:97155291-97683983	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv542179	chr14:97155291-97683983	Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	nsv948620	chr14:97334444-98133191	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
4	nsv832867	chr14:97365919-97541763	Bivalent/Poised TSS Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:97379400-97411800	Weak transcription	Primary T cells from cord blood	blood
2	chr14:97388400-97397400	Weak transcription	Dnd41	blood
3	chr14:97390800-97405800	Weak transcription	Spleen	Spleen
4	chr14:97392200-97397600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr14:97392200-97401000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr14:97392200-97402800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr14:97395800-97397200	Weak transcription	Fetal Brain Male	brain
8	chr14:97395800-97397600	Enhancers	Fetal Heart	heart
9	chr14:97396400-97397600	Enhancers	Fetal Brain Female	brain
10	chr14:97396400-97397800	Enhancers	Brain Germinal Matrix	brain
11	chr14:97396600-97402800	Weak transcription	Gastric	stomach

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