Variant report

Variant	rs61984009
Chromosome Location	chr14:64034437-64034438
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs11158497	0.82[EUR][1000 genomes]
rs11845514	0.86[EUR][1000 genomes]
rs11847033	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11850853	0.83[AMR][1000 genomes]
rs12147764	0.83[AMR][1000 genomes]
rs12147926	0.82[EUR][1000 genomes]
rs55683626	0.91[AMR][1000 genomes]
rs55758170	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs55763522	0.82[EUR][1000 genomes]
rs55919053	0.83[AMR][1000 genomes]
rs56015314	0.83[AMR][1000 genomes]
rs56021364	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs56051693	0.83[AMR][1000 genomes]
rs56060943	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs56169803	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs56280069	0.83[AMR][1000 genomes]
rs56301550	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs56388534	0.83[AMR][1000 genomes]
rs59420981	0.82[EUR][1000 genomes]
rs61692440	0.82[EUR][1000 genomes]
rs61984029	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs61984031	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61984033	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61984036	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61984044	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs61984045	0.91[AMR][1000 genomes]
rs61984046	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61984048	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61984051	0.82[EUR][1000 genomes]
rs61984055	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61985691	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs73263676	0.82[EUR][1000 genomes]
rs8017282	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527251	chr14:63400786-64068806	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv520528	chr14:63400786-64157117	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
3	nsv915909	chr14:63620440-64560369	Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
4	nsv974442	chr14:64024425-64046914	Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64030200-64034800	Enhancers	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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