Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:80019688..80022858-chr16:80044337..80047415,3	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10514477	1.00[EUR][1000 genomes]
rs11640073	0.94[EUR][1000 genomes]
rs11640447	0.91[EUR][1000 genomes]
rs16951938	0.90[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs4889063	0.93[EUR][1000 genomes]
rs58399708	0.80[EUR][1000 genomes]
rs62042298	0.94[EUR][1000 genomes]
rs62042299	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62042300	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62042301	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62042302	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62042303	0.96[ASN][1000 genomes]
rs62042323	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7190101	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7192124	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7195573	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8053286	0.87[EUR][1000 genomes]
rs9319546	1.00[EUR][1000 genomes]
rs9788812	0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9788879	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9788937	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv573285	chr16:79158182-80127326	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	nsv573294	chr16:80005642-80131944	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:80020600-80022800	Weak transcription	Fetal Lung	lung
2	chr16:80021200-80023800	Enhancers	K562	blood
3	chr16:80022000-80022800	Enhancers	Fetal Intestine Small	intestine
4	chr16:80022000-80023200	Enhancers	HSMMtube	muscle
5	chr16:80022000-80023600	Enhancers	Placenta	Placenta
6	chr16:80022200-80023800	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr16:80022400-80023000	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr16:80022400-80023800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr16:80022600-80023400	Enhancers	NH-A	brain
10	chr16:80022600-80024000	Enhancers	Breast Myoepithelial Primary Cells	Breast

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