Variant report

Variant	rs62071332
Chromosome Location	chr17:59565143-59565144
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:59489674..59490313-chr17:59564952..59565665,2	MCF-7	breast:

rs_ID	r²[population]
rs2270150	0.86[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs3744435	0.82[AFR][1000 genomes]
rs3785822	0.95[ASN][1000 genomes]
rs3785823	0.95[ASN][1000 genomes]
rs3785825	0.91[ASN][1000 genomes]
rs67763506	0.95[ASN][1000 genomes]
rs7213643	0.95[ASN][1000 genomes]
rs7214133	0.95[ASN][1000 genomes]
rs73334581	0.95[ASN][1000 genomes]
rs8070051	0.91[ASN][1000 genomes]

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:59562400-59566400	Enhancers	HepG2	liver
2	chr17:59562800-59565800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
3	chr17:59563200-59565800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr17:59563200-59566800	Weak transcription	Esophagus	oesophagus
5	chr17:59563200-59567200	Enhancers	Fetal Lung	lung
6	chr17:59563400-59565200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr17:59563400-59565400	Enhancers	Fetal Muscle Leg	muscle
8	chr17:59563400-59565600	Weak transcription	Lung	lung
9	chr17:59563600-59565800	Bivalent Enhancer	Fetal Stomach	stomach
10	chr17:59563800-59565400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr17:59564000-59565200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr17:59564000-59567000	Weak transcription	Pancreas	Pancrea
13	chr17:59564200-59572600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr17:59564200-59572800	Weak transcription	Right Atrium	heart
15	chr17:59564400-59565400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr17:59564400-59565400	Weak transcription	Fetal Intestine Large	intestine
17	chr17:59564400-59565400	Weak transcription	Fetal Intestine Small	intestine
18	chr17:59564800-59566400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr17:59564800-59566800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr17:59564800-59566800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr17:59564800-59566800	Weak transcription	NHLF	lung
22	chr17:59564800-59570200	Weak transcription	HUES6 Cell Line	embryonic stem cell
23	chr17:59564800-59573800	Weak transcription	Spleen	Spleen
24	chr17:59564800-59576000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr17:59565000-59567400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr17:59565000-59568000	Weak transcription	Placenta	Placenta

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