The 2.0 version of rSNPBase

Variant report

Variant rs62142088
Chromosome Location chr2:32247880-32247881
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32236400-32250800 Weak transcription Spleen Spleen
2 chr2:32236400-32264200 Weak transcription Gastric stomach
3 chr2:32236600-32253400 Weak transcription Esophagus oesophagus
4 chr2:32236600-32261000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr2:32236600-32263200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:32236600-32263800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr2:32236600-32263800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr2:32236600-32263800 Weak transcription Psoas Muscle Psoas
9 chr2:32236600-32264200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr2:32236600-32264200 Weak transcription Right Atrium heart
11 chr2:32236600-32264200 Weak transcription Right Ventricle heart
12 chr2:32236800-32248000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr2:32236800-32248200 Weak transcription HSMM muscle
14 chr2:32236800-32250800 Weak transcription NH-A brain
15 chr2:32236800-32251600 Weak transcription Stomach Mucosa stomach
16 chr2:32236800-32253200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr2:32236800-32258800 Weak transcription Fetal Kidney kidney
18 chr2:32236800-32263000 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr2:32236800-32263800 Weak transcription Small Intestine intestine
20 chr2:32236800-32264000 Weak transcription Brain Angular Gyrus brain
21 chr2:32236800-32264000 Weak transcription Fetal Heart heart
22 chr2:32236800-32264000 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr2:32236800-32264000 Weak transcription HSMMtube muscle
24 chr2:32237000-32248000 Weak transcription Rectal Smooth Muscle rectum
25 chr2:32237000-32248200 Weak transcription Muscle Satellite Cultured Cells --
26 chr2:32237000-32248200 Weak transcription HUVEC blood vessel
27 chr2:32237000-32250800 Weak transcription H9 Cell Line embryonic stem cell
28 chr2:32237000-32251200 Weak transcription Colonic Mucosa Colon
29 chr2:32237000-32259600 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr2:32237000-32262000 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr2:32237000-32263600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr2:32237000-32263800 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr2:32237000-32263800 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr2:32237200-32252800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr2:32237400-32248400 Weak transcription Primary B cells from cord blood blood
36 chr2:32237400-32264000 Weak transcription GM12878-XiMat blood
37 chr2:32238600-32248200 Weak transcription K562 blood
38 chr2:32238800-32248200 Strong transcription Fetal Stomach stomach
39 chr2:32238800-32258800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr2:32240000-32254000 Strong transcription Fetal Intestine Large intestine
41 chr2:32240400-32254000 Strong transcription Fetal Muscle Trunk muscle
42 chr2:32240800-32255600 Strong transcription Fetal Muscle Leg muscle
43 chr2:32240800-32260200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr2:32241000-32254600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
45 chr2:32241400-32255400 Strong transcription HUES48 Cell Line embryonic stem cell
46 chr2:32241400-32255400 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr2:32242600-32254400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr2:32242600-32254800 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr2:32243200-32248200 Strong transcription Fetal Intestine Small intestine
50 chr2:32243400-32259200 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015