The 2.0 version of rSNPBase

Variant report

Variant rs62142444
Chromosome Location chr2:32068168-32068169
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32054400-32080000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr2:32054600-32090400 Weak transcription HSMM muscle
3 chr2:32057200-32117200 Weak transcription Muscle Satellite Cultured Cells --
4 chr2:32061600-32172800 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr2:32063000-32092000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr2:32064600-32142400 Weak transcription NHDF-Ad bronchial
7 chr2:32065000-32084800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr2:32065200-32068400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr2:32065400-32088400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr2:32065400-32123000 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr2:32066200-32072000 Weak transcription Fetal Intestine Small intestine
12 chr2:32066200-32081200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr2:32066400-32078400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr2:32066400-32079200 Weak transcription Primary B cells from cord blood blood
15 chr2:32066600-32072400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr2:32066600-32077600 Weak transcription HSMMtube muscle
17 chr2:32066600-32100600 Weak transcription Primary T cells from cord blood blood
18 chr2:32066800-32068200 Weak transcription Ovary ovary
19 chr2:32066800-32074600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr2:32066800-32101800 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr2:32066800-32103400 Weak transcription Fetal Thymus thymus
22 chr2:32067000-32106200 Weak transcription Left Ventricle heart
23 chr2:32067200-32106000 Weak transcription Fetal Muscle Leg muscle
24 chr2:32067600-32089600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr2:32067800-32068200 Strong transcription Fetal Brain Female brain
26 chr2:32067800-32068400 Strong transcription Liver Liver
27 chr2:32067800-32068600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr2:32067800-32068600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr2:32067800-32068600 Strong transcription A549 lung
30 chr2:32067800-32069000 Strong transcription Osteobl bone
31 chr2:32067800-32092000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr2:32067800-32103400 Weak transcription HMEC breast
33 chr2:32068000-32068200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
34 chr2:32068000-32068200 ZNF genes & repeats Duodenum Mucosa Duodenum
35 chr2:32068000-32068200 ZNF genes & repeats Fetal Kidney kidney
36 chr2:32068000-32068400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
37 chr2:32068000-32068400 ZNF genes & repeats NHEK skin
38 chr2:32068000-32068600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr2:32068000-32068600 Strong transcription Primary neutrophils fromperipheralblood blood
40 chr2:32068000-32068600 ZNF genes & repeats Primary hematopoietic stem cells blood
41 chr2:32068000-32068600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr2:32068000-32088600 Weak transcription NH-A brain
43 chr2:32068000-32121400 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015