Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:100784123..100785960-chr2:100793571..100795135,2	K562	blood:
2	chr2:100794586..100795120-chr2:100859430..100860008,2	MCF-7	breast:
3	chr2:100793774..100796720-chr2:100799072..100801535,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10199628	1.00[ASN][1000 genomes]
rs17023512	1.00[ASN][1000 genomes]
rs17023563	0.83[AFR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17023571	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17023655	1.00[ASN][1000 genomes]
rs56993260	1.00[ASN][1000 genomes]
rs62148113	1.00[ASN][1000 genomes]
rs62148114	1.00[ASN][1000 genomes]
rs62148119	1.00[ASN][1000 genomes]
rs62149354	1.00[ASN][1000 genomes]
rs62150260	1.00[ASN][1000 genomes]
rs62150261	1.00[ASN][1000 genomes]
rs62150270	1.00[ASN][1000 genomes]
rs62150271	1.00[ASN][1000 genomes]
rs62150274	1.00[ASN][1000 genomes]
rs6743817	1.00[ASN][1000 genomes]
rs6745099	1.00[ASN][1000 genomes]
rs6748652	1.00[ASN][1000 genomes]
rs72819176	1.00[ASN][1000 genomes]
rs72819179	1.00[ASN][1000 genomes]
rs7601715	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1003343	chr2:100241560-100848900	Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv535843	chr2:100241560-100848900	Genic enhancers Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:100791000-100809000	Weak transcription	Right Atrium	heart
2	chr2:100794000-100796000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr2:100794400-100795200	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr2:100794400-100795200	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr2:100794400-100795200	Enhancers	Primary B cells from peripheral blood	blood
6	chr2:100794600-100797200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr2:100794800-100795200	Active TSS	A549	lung
8	chr2:100795000-100795200	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
9	chr2:100795000-100799000	Weak transcription	Monocytes-CD14+_RO01746	blood

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