Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10497975	0.85[EUR][1000 genomes]
rs11888697	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12987104	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13000920	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13027397	0.86[EUR][1000 genomes]
rs1505370	0.87[EUR][1000 genomes]
rs1505371	0.88[EUR][1000 genomes]
rs1505372	0.86[AFR][1000 genomes]
rs1505377	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17259910	0.85[EUR][1000 genomes]
rs17261653	0.80[EUR][1000 genomes]
rs17325612	0.86[EUR][1000 genomes]
rs17327185	0.80[EUR][1000 genomes]
rs1921629	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1982717	0.84[EUR][1000 genomes]
rs2062929	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2062931	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs34511581	0.80[EUR][1000 genomes]
rs34947061	0.85[EUR][1000 genomes]
rs35610945	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs56102637	0.84[EUR][1000 genomes]
rs62186285	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62186287	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62186292	0.87[EUR][1000 genomes]
rs979452	0.82[EUR][1000 genomes]
rs982075	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834527	chr2:213115966-213334308	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1004573	chr2:213186537-213365252	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
3	nsv875811	chr2:213200920-213347104	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:213307200-213310200	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr2:213307200-213313800	Weak transcription	Fetal Kidney	kidney
3	chr2:213308000-213312600	Weak transcription	Brain Hippocampus Middle	brain
4	chr2:213309400-213312800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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