Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10166052	0.85[EUR][1000 genomes]
rs10168850	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10194811	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11675580	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11678974	0.85[EUR][1000 genomes]
rs11892661	1.00[ASN][1000 genomes]
rs12694281	0.89[EUR][1000 genomes]
rs13000748	1.00[ASN][1000 genomes]
rs13389790	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13430619	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1546371	0.90[EUR][1000 genomes]
rs17259910	1.00[ASN][1000 genomes]
rs17261653	1.00[ASN][1000 genomes]
rs17262115	1.00[ASN][1000 genomes]
rs17325842	0.85[EUR][1000 genomes]
rs1842767	0.84[EUR][1000 genomes]
rs2047950	0.89[EUR][1000 genomes]
rs2062930	0.80[EUR][1000 genomes]
rs2101152	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2128318	0.85[EUR][1000 genomes]
rs2170529	0.84[EUR][1000 genomes]
rs2220024	0.82[EUR][1000 genomes]
rs2860080	0.85[EUR][1000 genomes]
rs34511581	1.00[ASN][1000 genomes]
rs56009609	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6735807	0.82[EUR][1000 genomes]
rs982075	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834527	chr2:213115966-213334308	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1004573	chr2:213186537-213365252	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
3	nsv875811	chr2:213200920-213347104	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
4	nsv432024	chr2:213314899-213446726	Bivalent/Poised TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:213328800-213334000	Weak transcription	Fetal Heart	heart

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