The 2.0 version of rSNPBase

Variant report

Variant rs62252069
Chromosome Location chr3:28321888-28321889
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:28303400-28322200 Weak transcription Small Intestine intestine
2 chr3:28303600-28340600 Weak transcription NHEK skin
3 chr3:28304200-28332400 Weak transcription Rectal Smooth Muscle rectum
4 chr3:28305600-28322600 Weak transcription Osteobl bone
5 chr3:28306400-28332400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr3:28306600-28335800 Weak transcription Hela-S3 cervix
7 chr3:28309000-28336600 Weak transcription HUVEC blood vessel
8 chr3:28313400-28322800 Weak transcription Colonic Mucosa Colon
9 chr3:28314200-28332400 Weak transcription H1 Cell Line embryonic stem cell
10 chr3:28314400-28332400 Weak transcription Ovary ovary
11 chr3:28314400-28365400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr3:28314600-28332600 Weak transcription Left Ventricle heart
13 chr3:28314800-28343400 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr3:28315000-28332400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr3:28315000-28333000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr3:28315000-28363000 Weak transcription A549 lung
17 chr3:28315200-28332200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr3:28315600-28325800 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr3:28315600-28326400 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr3:28315600-28332400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr3:28315600-28332400 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr3:28315600-28332400 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr3:28315800-28332200 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr3:28315800-28332200 Weak transcription Stomach Smooth Muscle stomach
25 chr3:28315800-28332400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr3:28316000-28322200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr3:28316000-28332000 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr3:28316200-28333200 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr3:28316400-28322200 Weak transcription Fetal Brain Female brain
30 chr3:28316400-28332000 Weak transcription K562 blood
31 chr3:28317000-28328400 Weak transcription Brain Anterior Caudate brain
32 chr3:28317200-28332200 Weak transcription Primary hematopoietic stem cells blood
33 chr3:28317400-28332000 Weak transcription Primary monocytes fromperipheralblood blood
34 chr3:28317400-28332400 Weak transcription HSMM muscle
35 chr3:28317400-28337200 Weak transcription Primary B cells from peripheral blood blood
36 chr3:28317600-28325800 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr3:28317600-28326000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr3:28317600-28331800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr3:28317600-28331800 Weak transcription GM12878-XiMat blood
40 chr3:28317600-28332200 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr3:28317600-28332400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr3:28317600-28332400 Weak transcription Fetal Muscle Trunk muscle
43 chr3:28317600-28332400 Weak transcription Lung lung
44 chr3:28317600-28332400 Weak transcription Thymus Thymus
45 chr3:28317600-28337000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr3:28317600-28337000 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr3:28317600-28337200 Weak transcription Duodenum Mucosa Duodenum
48 chr3:28317600-28337600 Weak transcription Fetal Intestine Large intestine
49 chr3:28317600-28341200 Weak transcription Fetal Thymus thymus
50 chr3:28317600-28380000 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015