The 2.0 version of rSNPBase

Variant report

Variant rs13093242
Chromosome Location chr3:28296070-28296071
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:28283800-28311400 Weak transcription Lung lung
2 chr3:28284000-28304800 Weak transcription Primary B cells from cord blood blood
3 chr3:28284000-28309600 Weak transcription Fetal Muscle Leg muscle
4 chr3:28284000-28313800 Weak transcription Ovary ovary
5 chr3:28284000-28317200 Weak transcription Gastric stomach
6 chr3:28284400-28305400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr3:28284400-28305800 Weak transcription Hela-S3 cervix
8 chr3:28284400-28311000 Weak transcription Fetal Intestine Small intestine
9 chr3:28284400-28312600 Weak transcription Fetal Lung lung
10 chr3:28284400-28321800 Weak transcription NHLF lung
11 chr3:28284600-28305600 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr3:28284600-28306000 Weak transcription A549 lung
13 chr3:28284600-28307200 Weak transcription Fetal Intestine Large intestine
14 chr3:28284600-28311200 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr3:28285200-28305200 Weak transcription Primary hematopoietic stem cells blood
16 chr3:28285200-28305600 Weak transcription Fetal Thymus thymus
17 chr3:28285600-28315400 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr3:28285800-28305400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr3:28285800-28311000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr3:28286000-28306000 Weak transcription K562 blood
21 chr3:28286000-28307200 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr3:28287200-28304800 Weak transcription Duodenum Mucosa Duodenum
23 chr3:28287600-28317000 Weak transcription Pancreas Pancrea
24 chr3:28288600-28305200 Weak transcription Liver Liver
25 chr3:28288600-28311200 Weak transcription Esophagus oesophagus
26 chr3:28289400-28305200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr3:28289400-28305200 Weak transcription Dnd41 blood
28 chr3:28291400-28311200 Weak transcription Aorta Aorta
29 chr3:28292200-28305800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr3:28292800-28300800 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr3:28292800-28311000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr3:28293000-28297800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr3:28293000-28305200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr3:28293000-28305600 Weak transcription Left Ventricle heart
35 chr3:28293200-28305600 Weak transcription Primary T cells from cord blood blood
36 chr3:28293600-28305600 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr3:28293600-28311200 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr3:28293800-28305800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr3:28293800-28309800 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr3:28294000-28309200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr3:28294200-28314400 Weak transcription HepG2 liver
42 chr3:28294400-28313800 Weak transcription H1 Cell Line embryonic stem cell
43 chr3:28294400-28314200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr3:28294600-28304200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr3:28294600-28313800 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr3:28294800-28297200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr3:28294800-28302800 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr3:28294800-28305200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr3:28294800-28313800 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr3:28294800-28316400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015