The 2.0 version of rSNPBase

Variant report

Variant rs62264128
Chromosome Location chr3:112071282-112071283
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:112052800-112076200 Weak transcription Right Ventricle heart
2 chr3:112053200-112076400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr3:112054800-112076800 Weak transcription Lung lung
4 chr3:112054800-112083000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr3:112055600-112080200 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr3:112055800-112076400 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr3:112056600-112076400 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr3:112059600-112075000 Strong transcription Fetal Thymus thymus
9 chr3:112061200-112083000 Weak transcription Colonic Mucosa Colon
10 chr3:112061400-112076000 Strong transcription Primary hematopoietic stem cells blood
11 chr3:112062400-112083000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr3:112062600-112076600 Strong transcription Primary B cells from cord blood blood
13 chr3:112062800-112074600 Strong transcription Primary B cells from peripheral blood blood
14 chr3:112063400-112074200 Strong transcription Brain Germinal Matrix brain
15 chr3:112064000-112076800 Weak transcription Left Ventricle heart
16 chr3:112064200-112074200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr3:112064200-112076800 Strong transcription Placenta Placenta
18 chr3:112064400-112075000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr3:112064400-112076800 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr3:112064800-112077200 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr3:112065600-112079600 Weak transcription Fetal Intestine Large intestine
22 chr3:112066000-112089800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr3:112066200-112073400 Genic enhancers iPS-18 Cell Line embryonic stem cell
24 chr3:112066600-112073600 Genic enhancers HUES64 Cell Line embryonic stem cell
25 chr3:112066800-112072800 Weak transcription Colon Smooth Muscle Colon
26 chr3:112066800-112076800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr3:112066800-112076800 Weak transcription Ovary ovary
28 chr3:112066800-112077000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr3:112067000-112079400 Weak transcription Rectal Smooth Muscle rectum
30 chr3:112067200-112073600 Strong transcription Fetal Lung lung
31 chr3:112067200-112075400 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr3:112067200-112076800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr3:112067200-112079800 Weak transcription Fetal Stomach stomach
34 chr3:112067200-112080400 Weak transcription Fetal Muscle Trunk muscle
35 chr3:112067400-112072200 Genic enhancers HUES48 Cell Line embryonic stem cell
36 chr3:112067400-112076800 Weak transcription Aorta Aorta
37 chr3:112067800-112071400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr3:112068400-112073800 Weak transcription Primary monocytes fromperipheralblood blood
39 chr3:112068600-112072200 Genic enhancers ES-I3 Cell Line embryonic stem cell
40 chr3:112068800-112071400 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr3:112068800-112072600 Genic enhancers HUES6 Cell Line embryonic stem cell
42 chr3:112068800-112074600 Enhancers HUVEC blood vessel
43 chr3:112069200-112076800 Weak transcription Thymus Thymus
44 chr3:112069200-112084000 Weak transcription Fetal Kidney kidney
45 chr3:112069200-112095400 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr3:112069400-112071600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr3:112069400-112075400 Strong transcription GM12878-XiMat blood
48 chr3:112070200-112072800 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr3:112070200-112073200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr3:112070200-112086200 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015