Variant report
| Variant | rs9818407 |
|---|---|
| Chromosome Location | chr3:112055952-112055953 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:112052600-112062400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 2 | chr3:112052600-112066400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 3 | chr3:112052800-112076200 | Weak transcription | Right Ventricle | heart |
| 4 | chr3:112053000-112056400 | Transcr. at gene 5' and 3' | Primary T helper cells PMA-I stimulated | -- |
| 5 | chr3:112053000-112057200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 6 | chr3:112053200-112062200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 7 | chr3:112053200-112066400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 8 | chr3:112053200-112076400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 9 | chr3:112053400-112057200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 10 | chr3:112053400-112057600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 11 | chr3:112053600-112056600 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 12 | chr3:112053800-112056200 | Transcr. at gene 5' and 3' | iPS-20b Cell Line | embryonic stem cell |
| 13 | chr3:112053800-112056200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 14 | chr3:112053800-112056800 | Weak transcription | HMEC | breast |
| 15 | chr3:112053800-112057000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 16 | chr3:112053800-112057000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 17 | chr3:112053800-112063800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 18 | chr3:112053800-112064200 | Weak transcription | Fetal Intestine Large | intestine |
| 19 | chr3:112054000-112056400 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 20 | chr3:112054000-112057200 | Enhancers | Adipose Nuclei | Adipose |
| 21 | chr3:112054000-112065800 | Weak transcription | Fetal Kidney | kidney |
| 22 | chr3:112054000-112068600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 23 | chr3:112054200-112056600 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 24 | chr3:112054200-112063800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 25 | chr3:112054200-112064000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 26 | chr3:112054400-112056000 | Enhancers | Thymus | Thymus |
| 27 | chr3:112054400-112056200 | Enhancers | Aorta | Aorta |
| 28 | chr3:112054400-112056400 | Transcr. at gene 5' and 3' | Primary hematopoietic stem cells short term culture | blood |
| 29 | chr3:112054400-112056600 | Flanking Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 30 | chr3:112054400-112058800 | Genic enhancers | HUES48 Cell Line | embryonic stem cell |
| 31 | chr3:112054400-112059200 | Weak transcription | Brain Substantia Nigra | brain |
| 32 | chr3:112054600-112056200 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 33 | chr3:112054600-112056400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 34 | chr3:112054600-112056600 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 35 | chr3:112054600-112057000 | Enhancers | Brain Anterior Caudate | brain |
| 36 | chr3:112054600-112059600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 37 | chr3:112054600-112059600 | Weak transcription | Fetal Muscle Leg | muscle |
| 38 | chr3:112054800-112056000 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 39 | chr3:112054800-112056200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 40 | chr3:112054800-112057000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 41 | chr3:112054800-112058000 | Genic enhancers | HUES64 Cell Line | embryonic stem cell |
| 42 | chr3:112054800-112059400 | Weak transcription | Right Atrium | heart |
| 43 | chr3:112054800-112059600 | Weak transcription | Primary B cells from cord blood | blood |
| 44 | chr3:112054800-112060800 | Enhancers | Brain Angular Gyrus | brain |
| 45 | chr3:112054800-112061800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 46 | chr3:112054800-112063400 | Weak transcription | Ovary | ovary |
| 47 | chr3:112054800-112063800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 48 | chr3:112054800-112066400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 49 | chr3:112054800-112076800 | Weak transcription | Lung | lung |
| 50 | chr3:112054800-112083000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
