Variant report
| Variant | rs62270394 |
|---|---|
| Chromosome Location | chr3:159531301-159531302 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:159518800-159531800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 2 | chr3:159523000-159531800 | Weak transcription | Right Atrium | heart |
| 3 | chr3:159523000-159536200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 4 | chr3:159523400-159531600 | Weak transcription | A549 | lung |
| 5 | chr3:159523400-159532000 | Weak transcription | Stomach Mucosa | stomach |
| 6 | chr3:159523400-159533000 | Weak transcription | Osteobl | bone |
| 7 | chr3:159523400-159537800 | Weak transcription | NH-A | brain |
| 8 | chr3:159523400-159541200 | Weak transcription | Fetal Kidney | kidney |
| 9 | chr3:159523400-159541400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 10 | chr3:159524200-159531800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 11 | chr3:159524600-159531400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 12 | chr3:159524600-159535800 | Weak transcription | Aorta | Aorta |
| 13 | chr3:159524600-159538600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 14 | chr3:159525200-159531400 | Weak transcription | HSMM | muscle |
| 15 | chr3:159525200-159531600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 16 | chr3:159525600-159540600 | Weak transcription | NHLF | lung |
| 17 | chr3:159525800-159531600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 18 | chr3:159525800-159531600 | Weak transcription | Brain Anterior Caudate | brain |
| 19 | chr3:159525800-159531800 | Weak transcription | Left Ventricle | heart |
| 20 | chr3:159525800-159536400 | Weak transcription | NHDF-Ad | bronchial |
| 21 | chr3:159525800-159539400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 22 | chr3:159526400-159531400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 23 | chr3:159526400-159531800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 24 | chr3:159526400-159531800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 25 | chr3:159526400-159535600 | Weak transcription | Colon Smooth Muscle | Colon |
| 26 | chr3:159526400-159541400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 27 | chr3:159526600-159531600 | Weak transcription | Fetal Muscle Leg | muscle |
| 28 | chr3:159526600-159532000 | Weak transcription | Fetal Stomach | stomach |
| 29 | chr3:159526600-159534400 | Weak transcription | Adipose Nuclei | Adipose |
| 30 | chr3:159526800-159531600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr3:159528800-159531600 | Weak transcription | Brain Substantia Nigra | brain |
| 32 | chr3:159529000-159531800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 33 | chr3:159530200-159532800 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 34 | chr3:159530600-159531400 | Genic enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 35 | chr3:159530600-159533200 | Enhancers | Brain Cingulate Gyrus | brain |
| 36 | chr3:159530800-159533400 | Enhancers | HMEC | breast |
| 37 | chr3:159531000-159532600 | Enhancers | Brain Angular Gyrus | brain |
| 38 | chr3:159531200-159531400 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 39 | chr3:159531200-159531600 | Weak transcription | Brain Hippocampus Middle | brain |
| 40 | chr3:159531200-159531800 | Enhancers | NHEK | skin |
| 41 | chr3:159531200-159532200 | Enhancers | Primary hematopoietic stem cells | blood |
| 42 | chr3:159531200-159532800 | Enhancers | Rectal Mucosa Donor 29 | rectum |
