Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:161102931..161104858-chr3:161108932..161110703,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs16832063	0.88[EUR][1000 genomes]
rs16832129	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16847274	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs56839556	0.86[EUR][1000 genomes]
rs62278054	0.89[AMR][1000 genomes]
rs62278056	0.89[AMR][1000 genomes]
rs62279918	0.88[EUR][1000 genomes]
rs62279920	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62279922	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62279923	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62279924	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62279925	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62279927	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62279929	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62279930	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62279931	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62279948	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62279950	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62279954	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62279955	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73162552	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73162554	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73162598	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931072	chr3:160669567-161159779	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
2	nsv533237	chr3:161019834-161804660	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	91 gene(s)	inside rSNPs	diseases
3	nsv829772	chr3:161047817-161202554	Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	88 gene(s)	inside rSNPs	diseases
4	nsv877710	chr3:161087857-161245414	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	84 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:161102800-161106200	Enhancers	Pancreatic Islets	Pancreatic Islet
2	chr3:161103200-161105600	Enhancers	Stomach Mucosa	stomach
3	chr3:161103200-161105800	Enhancers	HepG2	liver
4	chr3:161103800-161108200	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr3:161104200-161106200	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr3:161104400-161107600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood

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