The 2.0 version of rSNPBase

Variant report

Variant rs62291561
Chromosome Location chr3:179493634-179493635
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179406200-179503000 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr3:179437400-179501800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr3:179449400-179503400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr3:179453200-179507600 Weak transcription NHEK skin
5 chr3:179467600-179503200 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr3:179472800-179510200 Weak transcription Psoas Muscle Psoas
7 chr3:179475200-179503200 Weak transcription Fetal Kidney kidney
8 chr3:179476200-179512200 Weak transcription Gastric stomach
9 chr3:179479000-179502600 Weak transcription Rectal Smooth Muscle rectum
10 chr3:179479000-179506200 Weak transcription Small Intestine intestine
11 chr3:179479200-179499400 Weak transcription Thymus Thymus
12 chr3:179479200-179500800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr3:179484600-179500000 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr3:179484600-179504400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr3:179484600-179518600 Weak transcription Muscle Satellite Cultured Cells --
16 chr3:179484800-179497800 Weak transcription Primary B cells from peripheral blood blood
17 chr3:179485000-179495600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr3:179485000-179497200 Weak transcription Fetal Brain Male brain
19 chr3:179485000-179497800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr3:179485000-179498000 Weak transcription Brain Inferior Temporal Lobe brain
21 chr3:179485000-179502000 Weak transcription Colon Smooth Muscle Colon
22 chr3:179485000-179504600 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr3:179485000-179505000 Weak transcription Duodenum Mucosa Duodenum
24 chr3:179485000-179525200 Weak transcription Brain Anterior Caudate brain
25 chr3:179485200-179499200 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr3:179485200-179500200 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr3:179485200-179517200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr3:179485200-179521200 Weak transcription Brain Cingulate Gyrus brain
29 chr3:179485400-179505400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr3:179485400-179508800 Weak transcription Primary T cells fromperipheralblood blood
31 chr3:179485600-179503400 Weak transcription Right Ventricle heart
32 chr3:179485800-179505200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr3:179486200-179499400 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr3:179486200-179500000 Weak transcription Brain Angular Gyrus brain
35 chr3:179486400-179494400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr3:179486400-179499400 Weak transcription Brain Hippocampus Middle brain
37 chr3:179486400-179499400 Weak transcription NH-A brain
38 chr3:179486400-179504400 Weak transcription HSMMtube muscle
39 chr3:179486400-179508800 Weak transcription A549 lung
40 chr3:179486400-179518600 Weak transcription NHDF-Ad bronchial
41 chr3:179486400-179519600 Weak transcription Hela-S3 cervix
42 chr3:179486600-179497200 Weak transcription Primary B cells from cord blood blood
43 chr3:179486800-179499400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr3:179487600-179495000 Weak transcription Colonic Mucosa Colon
45 chr3:179488200-179502000 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr3:179488600-179494200 Strong transcription Fetal Muscle Trunk muscle
47 chr3:179488800-179504000 Strong transcription Dnd41 blood
48 chr3:179488800-179510800 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr3:179489600-179499800 Weak transcription Stomach Mucosa stomach
50 chr3:179489600-179506200 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015