The 2.0 version of rSNPBase

Variant report

Variant rs62306393
Chromosome Location chr4:90042785-90042786
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:90033400-90048200 Weak transcription Ovary ovary
2 chr4:90033400-90049200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr4:90033600-90043800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr4:90033600-90045600 Weak transcription Esophagus oesophagus
5 chr4:90033600-90045600 Weak transcription Pancreas Pancrea
6 chr4:90033600-90049200 Weak transcription Gastric stomach
7 chr4:90033600-90052200 Weak transcription Aorta Aorta
8 chr4:90034000-90044000 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr4:90034200-90044000 Weak transcription Duodenum Mucosa Duodenum
10 chr4:90034400-90043000 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr4:90034400-90044000 Weak transcription Brain Substantia Nigra brain
12 chr4:90034800-90049200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr4:90035000-90043600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr4:90035400-90044600 Weak transcription Fetal Muscle Leg muscle
15 chr4:90035600-90043600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr4:90035600-90044000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr4:90036600-90044800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr4:90037000-90046200 Weak transcription Primary T cells from cord blood blood
19 chr4:90039200-90042800 Weak transcription HepG2 liver
20 chr4:90039200-90044600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr4:90039800-90043400 Weak transcription Placenta Placenta
22 chr4:90039800-90043800 Weak transcription Liver Liver
23 chr4:90040600-90042800 Enhancers A549 lung
24 chr4:90041000-90043200 Weak transcription HMEC breast
25 chr4:90041200-90043200 Weak transcription NHEK skin
26 chr4:90041400-90043800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr4:90041600-90043000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr4:90041600-90044000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr4:90041600-90044000 Weak transcription NH-A brain
30 chr4:90041600-90045200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr4:90042200-90047600 Enhancers Fetal Intestine Large intestine
32 chr4:90042400-90044800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:90042600-90043400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr4:90042600-90044200 Enhancers K562 blood
35 chr4:90042600-90049600 Enhancers Fetal Intestine Small intestine

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Last update: Aug 31, 2015