The 2.0 version of rSNPBase

Variant report

Variant rs62369188
Chromosome Location chr5:74332569-74332570
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:74313600-74341800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr5:74315200-74332800 Weak transcription NHDF-Ad bronchial
3 chr5:74317600-74344200 Weak transcription Ovary ovary
4 chr5:74317800-74332600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr5:74320400-74332600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr5:74322800-74334400 Weak transcription Aorta Aorta
7 chr5:74324400-74333600 Strong transcription Thymus Thymus
8 chr5:74325200-74332600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr5:74325600-74332600 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr5:74327400-74332600 Enhancers Primary T killer memory cells from peripheral blood blood
11 chr5:74327400-74333200 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr5:74327600-74332600 Weak transcription NHLF lung
13 chr5:74328000-74339400 Weak transcription Fetal Stomach stomach
14 chr5:74328600-74333000 Weak transcription Pancreas Pancrea
15 chr5:74328600-74345600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr5:74328800-74333200 Enhancers Primary T helper cells fromperipheralblood blood
17 chr5:74329000-74332600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr5:74329200-74334200 Enhancers Stomach Mucosa stomach
19 chr5:74329200-74346800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr5:74329600-74338000 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr5:74329800-74334800 Strong transcription Duodenum Mucosa Duodenum
22 chr5:74329800-74344400 Weak transcription H9 Cell Line embryonic stem cell
23 chr5:74330000-74339800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr5:74330000-74344400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr5:74330400-74339400 Weak transcription Gastric stomach
26 chr5:74330400-74340400 Weak transcription Stomach Smooth Muscle stomach
27 chr5:74330400-74341800 Weak transcription H1 Cell Line embryonic stem cell
28 chr5:74330400-74344200 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr5:74330600-74333200 Enhancers Primary T helper naive cells from peripheral blood blood
30 chr5:74330600-74333400 Strong transcription Fetal Thymus thymus
31 chr5:74330600-74337200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
32 chr5:74330600-74339400 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr5:74330600-74339400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr5:74330600-74339600 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr5:74330600-74339600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr5:74330600-74341800 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr5:74330600-74342600 Weak transcription Colon Smooth Muscle Colon
38 chr5:74330600-74345400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr5:74330600-74348000 Weak transcription Primary hematopoietic stem cells blood
40 chr5:74331000-74333200 Enhancers Primary T helper naive cells fromperipheralblood blood
41 chr5:74331200-74332600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr5:74331400-74333200 Genic enhancers Primary T cells from cord blood blood
43 chr5:74331400-74333200 Strong transcription Fetal Intestine Large intestine
44 chr5:74331400-74345400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr5:74331400-74345600 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr5:74331600-74333000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr5:74331600-74333000 Weak transcription Fetal Intestine Small intestine
48 chr5:74331600-74333400 Weak transcription Placenta Placenta
49 chr5:74331600-74339800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr5:74331600-74344000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015