Variant report

Variant	rs62418268
Chromosome Location	chr6:69656416-69656417
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:69656160..69659095-chr6:69677328..69679855,2	K562	blood:
2	chr6:69655289..69656964-chr6:69658212..69660418,2	K562	blood:

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10485431	0.83[EUR][1000 genomes]
rs10485432	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11964646	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12196150	1.00[ASN][1000 genomes]
rs12524100	1.00[ASN][1000 genomes]
rs12524957	1.00[ASN][1000 genomes]
rs12526204	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12527569	1.00[ASN][1000 genomes]
rs12528300	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12530394	1.00[ASN][1000 genomes]
rs17399055	0.83[EUR][1000 genomes]
rs1880177	1.00[ASN][1000 genomes]
rs34580444	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4706062	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62416367	1.00[ASN][1000 genomes]
rs62416368	1.00[ASN][1000 genomes]
rs62416395	1.00[ASN][1000 genomes]
rs62416397	1.00[ASN][1000 genomes]
rs62416398	1.00[ASN][1000 genomes]
rs62416399	1.00[ASN][1000 genomes]
rs62416400	1.00[ASN][1000 genomes]
rs62416401	1.00[ASN][1000 genomes]
rs62416402	1.00[ASN][1000 genomes]
rs62416403	1.00[ASN][1000 genomes]
rs62416405	1.00[ASN][1000 genomes]
rs62416406	0.89[ASN][1000 genomes]
rs62416440	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62416449	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62418264	1.00[ASN][1000 genomes]
rs62418267	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62418270	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62418272	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62418273	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62418276	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62418568	1.00[ASN][1000 genomes]
rs62418570	1.00[ASN][1000 genomes]
rs62418572	1.00[ASN][1000 genomes]
rs62418577	1.00[ASN][1000 genomes]
rs67653429	1.00[ASN][1000 genomes]
rs6921402	1.00[ASN][1000 genomes]
rs73480159	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73747866	0.81[AFR][1000 genomes]
rs73747868	0.93[AFR][1000 genomes]
rs73747871	0.93[AFR][1000 genomes]
rs7454736	1.00[ASN][1000 genomes]
rs7748808	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7759377	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7767423	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69644600-69665800	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr6:69645200-69661200	Weak transcription	Left Ventricle	heart
3	chr6:69645600-69679000	Weak transcription	Fetal Brain Female	brain
4	chr6:69646000-69685000	Weak transcription	Fetal Lung	lung
5	chr6:69646200-69677200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr6:69647600-69659200	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr6:69647600-69659200	Weak transcription	Brain Cingulate Gyrus	brain
8	chr6:69647600-69677800	Weak transcription	Brain Anterior Caudate	brain
9	chr6:69652200-69684600	Weak transcription	Brain Angular Gyrus	brain
10	chr6:69652600-69658000	Weak transcription	Fetal Intestine Small	intestine
11	chr6:69652800-69672800	Weak transcription	Fetal Brain Male	brain
12	chr6:69654000-69661200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr6:69654400-69677600	Weak transcription	Brain Hippocampus Middle	brain
14	chr6:69655000-69664200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr6:69655000-69677600	Weak transcription	Brain Substantia Nigra	brain

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