Variant report

Variant	rs62418276
Chromosome Location	chr6:69664317-69664318
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 62 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:62)

rs_ID	r²[population]
rs10485431	1.00[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs10485432	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11964646	0.91[EUR][1000 genomes]
rs12196150	1.00[ASN][1000 genomes]
rs12524100	1.00[ASN][1000 genomes]
rs12524957	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12525831	1.00[AFR][1000 genomes]
rs12525989	1.00[AFR][1000 genomes]
rs12526204	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12527157	1.00[AFR][1000 genomes]
rs12527549	1.00[AFR][1000 genomes]
rs12527569	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12528300	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12529646	1.00[AFR][1000 genomes]
rs12530394	1.00[ASN][1000 genomes]
rs17399055	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs17400148	1.00[AFR][1000 genomes]
rs17401852	1.00[AFR][1000 genomes]
rs1880177	1.00[ASN][1000 genomes]
rs34580444	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3798984	1.00[AFR][1000 genomes]
rs45602231	1.00[AFR][1000 genomes]
rs4706035	1.00[AFR][1000 genomes]
rs4706062	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62416367	1.00[ASN][1000 genomes]
rs62416368	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs62416395	1.00[ASN][1000 genomes]
rs62416397	1.00[ASN][1000 genomes]
rs62416398	1.00[ASN][1000 genomes]
rs62416399	1.00[ASN][1000 genomes]
rs62416400	1.00[ASN][1000 genomes]
rs62416401	1.00[ASN][1000 genomes]
rs62416402	1.00[ASN][1000 genomes]
rs62416403	1.00[ASN][1000 genomes]
rs62416405	1.00[ASN][1000 genomes]
rs62416406	0.89[ASN][1000 genomes]
rs62416440	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62416449	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62416770	1.00[AFR][1000 genomes]
rs62418264	1.00[ASN][1000 genomes]
rs62418267	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62418268	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62418270	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62418272	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62418273	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62418281	1.00[AFR][1000 genomes]
rs62418296	1.00[AFR][1000 genomes]
rs62418299	1.00[AFR][1000 genomes]
rs62418303	1.00[AFR][1000 genomes]
rs62418566	1.00[AFR][1000 genomes]
rs62418567	1.00[AFR][1000 genomes]
rs62418568	1.00[ASN][1000 genomes]
rs62418570	1.00[ASN][1000 genomes]
rs62418572	1.00[ASN][1000 genomes]
rs62418577	1.00[ASN][1000 genomes]
rs67653429	1.00[ASN][1000 genomes]
rs6921402	1.00[ASN][1000 genomes]
rs73480159	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7454736	1.00[ASN][1000 genomes]
rs7748808	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7759377	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7767423	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69644600-69665800	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr6:69645600-69679000	Weak transcription	Fetal Brain Female	brain
3	chr6:69646000-69685000	Weak transcription	Fetal Lung	lung
4	chr6:69646200-69677200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr6:69647600-69677800	Weak transcription	Brain Anterior Caudate	brain
6	chr6:69652200-69684600	Weak transcription	Brain Angular Gyrus	brain
7	chr6:69652800-69672800	Weak transcription	Fetal Brain Male	brain
8	chr6:69654400-69677600	Weak transcription	Brain Hippocampus Middle	brain
9	chr6:69655000-69677600	Weak transcription	Brain Substantia Nigra	brain
10	chr6:69659600-69669600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr6:69661400-69665000	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr6:69661800-69665800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr6:69664200-69666800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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