Variant report

No.	Distal block	Cell Line	Cell type
1	6:74056539-74059296..6:74099986-74112890	Hela-S3	cervix:
2	6:74056539-74059296..6:74062967-74076046	Hela-S3	cervix:
3	6:74056539-74059296..6:74160392-74184826	K562	blood:
4	chr17:41465887..41467802-chr6:74056718..74058238,2	MCF-7	breast:
5	6:74056539-74059296..6:74078047-74099067	Hela-S3	cervix:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs12190522	0.82[ASN][1000 genomes]
rs12194939	1.00[EUR][1000 genomes]
rs12198600	0.82[ASN][1000 genomes]
rs12201569	1.00[EUR][1000 genomes]
rs12203222	0.82[ASN][1000 genomes]
rs12205147	1.00[EUR][1000 genomes]
rs12206493	1.00[EUR][1000 genomes]
rs12206527	0.90[EUR][1000 genomes]
rs12211460	1.00[EUR][1000 genomes]
rs12212251	1.00[EUR][1000 genomes]
rs12214308	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12214703	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17810318	1.00[AFR][1000 genomes]
rs34253887	1.00[EUR][1000 genomes]
rs510852	0.89[EUR][1000 genomes]
rs522858	1.00[EUR][1000 genomes]
rs55756640	1.00[AFR][1000 genomes]
rs55776330	1.00[EUR][1000 genomes]
rs55884910	1.00[EUR][1000 genomes]
rs55899720	1.00[AFR][1000 genomes]
rs62440569	0.82[ASN][1000 genomes]
rs62440570	0.82[ASN][1000 genomes]
rs62440583	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62440592	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3410973	chr6:73716033-74419545	Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	191 gene(s)	inside rSNPs	diseases
2	nsv830693	chr6:74049342-74216080	Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:74056000-74058000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:74056600-74058000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr6:74057200-74058000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr6:74057400-74059400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr6:74057400-74061400	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr6:74057800-74058400	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
7	chr6:74057800-74058400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

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