The 2.0 version of rSNPBase

Variant report

Variant rs62567918
Chromosome Location chr9:78998465-78998466
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:78986600-79008400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr9:78987600-79007800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr9:78988200-79002600 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr9:78988200-79003200 Weak transcription HSMMtube muscle
5 chr9:78988200-79008400 Weak transcription Brain Substantia Nigra brain
6 chr9:78988200-79008400 Weak transcription Fetal Heart heart
7 chr9:78988400-78999000 Weak transcription Fetal Muscle Trunk muscle
8 chr9:78988400-78999000 Weak transcription Spleen Spleen
9 chr9:78988400-78999600 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr9:78988400-79002200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr9:78988600-79001000 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr9:78988600-79001000 Weak transcription Brain Inferior Temporal Lobe brain
13 chr9:78988600-79002400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr9:78988600-79007800 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr9:78988600-79008200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr9:78988800-78999800 Weak transcription Brain Anterior Caudate brain
17 chr9:78988800-79006000 Weak transcription Brain Angular Gyrus brain
18 chr9:78988800-79007200 Weak transcription Brain Hippocampus Middle brain
19 chr9:78988800-79008400 Weak transcription Brain Cingulate Gyrus brain
20 chr9:78989000-78999800 Weak transcription GM12878-XiMat blood
21 chr9:78989000-79000000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr9:78989000-79000200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr9:78989800-78999800 Weak transcription Aorta Aorta
24 chr9:78990000-78998600 Weak transcription Colonic Mucosa Colon
25 chr9:78990000-79005400 Weak transcription Small Intestine intestine
26 chr9:78990200-78999000 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr9:78990200-79007800 Weak transcription Fetal Brain Male brain
28 chr9:78990200-79008400 Weak transcription Right Ventricle heart
29 chr9:78990400-78998800 Weak transcription Primary hematopoietic stem cells blood
30 chr9:78990400-78999000 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr9:78990400-78999200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr9:78990400-78999200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr9:78990400-78999200 Weak transcription Stomach Smooth Muscle stomach
34 chr9:78990400-78999600 Weak transcription Left Ventricle heart
35 chr9:78990400-78999600 Weak transcription HSMM muscle
36 chr9:78990400-78999800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr9:78990400-78999800 Weak transcription Fetal Muscle Leg muscle
38 chr9:78990400-79001000 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr9:78990400-79002600 Weak transcription Esophagus oesophagus
40 chr9:78990400-79008200 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr9:78990400-79008400 Weak transcription Fetal Kidney kidney
42 chr9:78990600-78999000 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr9:78990600-78999000 Weak transcription Osteobl bone
44 chr9:78990600-78999600 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr9:78990600-78999800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr9:78990600-78999800 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr9:78990600-78999800 Weak transcription HepG2 liver
48 chr9:78990600-79002400 Weak transcription Fetal Intestine Small intestine
49 chr9:78990600-79003000 Weak transcription Colon Smooth Muscle Colon
50 chr9:78990600-79005600 Weak transcription K562 blood

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Last update: Aug 31, 2015