The 2.0 version of rSNPBase

Variant report

Variant rs11144870
Chromosome Location chr9:79004213-79004214
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:78986600-79008400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr9:78987600-79007800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr9:78988200-79008400 Weak transcription Brain Substantia Nigra brain
4 chr9:78988200-79008400 Weak transcription Fetal Heart heart
5 chr9:78988600-79007800 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr9:78988600-79008200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr9:78988800-79006000 Weak transcription Brain Angular Gyrus brain
8 chr9:78988800-79007200 Weak transcription Brain Hippocampus Middle brain
9 chr9:78988800-79008400 Weak transcription Brain Cingulate Gyrus brain
10 chr9:78990000-79005400 Weak transcription Small Intestine intestine
11 chr9:78990200-79007800 Weak transcription Fetal Brain Male brain
12 chr9:78990200-79008400 Weak transcription Right Ventricle heart
13 chr9:78990400-79008200 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr9:78990400-79008400 Weak transcription Fetal Kidney kidney
15 chr9:78990600-79005600 Weak transcription K562 blood
16 chr9:78990600-79008400 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr9:78990600-79008400 Weak transcription Fetal Lung lung
18 chr9:78990600-79008400 Weak transcription Rectal Smooth Muscle rectum
19 chr9:78990800-79008400 Weak transcription NHLF lung
20 chr9:78992200-79008600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr9:78994200-79005200 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr9:78995200-79007600 Weak transcription Gastric stomach
23 chr9:78995200-79007600 Weak transcription HMEC breast
24 chr9:78995200-79007600 Weak transcription NHEK skin
25 chr9:78995200-79008400 Weak transcription Stomach Mucosa stomach
26 chr9:78995200-79008600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr9:78996000-79008400 Weak transcription H1 Cell Line embryonic stem cell
28 chr9:78997000-79007600 Weak transcription Lung lung
29 chr9:78997600-79005800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr9:78997600-79008400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr9:78997800-79004400 Strong transcription Primary B cells from cord blood blood
32 chr9:78997800-79004400 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr9:78997800-79008400 Weak transcription H9 Cell Line embryonic stem cell
34 chr9:78998000-79004400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr9:78998400-79008400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr9:78998800-79007800 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr9:78998800-79008600 Weak transcription Placenta Amnion Placenta Amnion
38 chr9:78999000-79007600 Weak transcription Muscle Satellite Cultured Cells --
39 chr9:78999200-79004400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr9:78999200-79004400 Strong transcription Fetal Intestine Large intestine
41 chr9:78999200-79004600 Strong transcription Duodenum Mucosa Duodenum
42 chr9:78999200-79008400 Weak transcription NH-A brain
43 chr9:78999400-79008600 Weak transcription Spleen Spleen
44 chr9:78999600-79004600 Strong transcription Primary T cells fromperipheralblood blood
45 chr9:78999600-79006600 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr9:78999800-79007600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr9:79000000-79004600 Strong transcription Dnd41 blood
48 chr9:79000000-79007000 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr9:79000200-79007400 Weak transcription Colonic Mucosa Colon
50 chr9:79000200-79008400 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015