Variant report

Variant rs62576395
Chromosome Location chr9:115552372-115552373
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:115527400-115552600 Weak transcription Esophagus oesophagus
2 chr9:115539000-115572800 Weak transcription Spleen Spleen
3 chr9:115543000-115552600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr9:115545400-115570200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr9:115547000-115552400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr9:115547000-115552600 Weak transcription Right Atrium heart
7 chr9:115547000-115555400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr9:115547000-115557800 Weak transcription Right Ventricle heart
9 chr9:115547200-115552600 Weak transcription Gastric stomach
10 chr9:115547200-115558000 Weak transcription Fetal Lung lung
11 chr9:115547200-115558400 Weak transcription Fetal Intestine Small intestine
12 chr9:115547200-115569600 Weak transcription Left Ventricle heart
13 chr9:115547200-115570000 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr9:115547400-115555000 Weak transcription Brain Cingulate Gyrus brain
15 chr9:115547400-115570000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr9:115549400-115552600 Weak transcription Lung lung
17 chr9:115549800-115555200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr9:115549800-115593600 Weak transcription Thymus Thymus
19 chr9:115550000-115555400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr9:115550200-115554400 Weak transcription Primary B cells from cord blood blood
21 chr9:115550400-115553000 Enhancers Brain Substantia Nigra brain
22 chr9:115550400-115553600 Enhancers Colon Smooth Muscle Colon
23 chr9:115550600-115552800 Enhancers Brain Hippocampus Middle brain
24 chr9:115550600-115553000 Enhancers Brain Inferior Temporal Lobe brain
25 chr9:115550600-115553400 Enhancers Rectal Smooth Muscle rectum
26 chr9:115550600-115555400 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr9:115550800-115552400 Enhancers Duodenum Smooth Muscle Duodenum
28 chr9:115550800-115552800 Enhancers Osteobl bone
29 chr9:115551000-115553400 Enhancers Placenta Amnion Placenta Amnion
30 chr9:115551000-115554600 Weak transcription Primary B cells from peripheral blood blood
31 chr9:115551200-115552600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr9:115551200-115552800 Enhancers Fetal Heart heart
33 chr9:115551200-115554000 Enhancers Fetal Intestine Large intestine
34 chr9:115551400-115552600 Enhancers GM12878-XiMat blood
35 chr9:115551400-115553000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr9:115551400-115553000 Enhancers Brain Anterior Caudate brain
37 chr9:115551400-115553000 Enhancers Ovary ovary
38 chr9:115551400-115553200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr9:115551600-115552400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr9:115551600-115552600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr9:115551600-115552600 Weak transcription Pancreas Pancrea
42 chr9:115551600-115552800 Enhancers Adipose Nuclei Adipose
43 chr9:115551600-115552800 Enhancers NH-A brain
44 chr9:115551600-115553000 Enhancers Skeletal Muscle Male skeletal muscle
45 chr9:115551600-115553000 Enhancers Skeletal Muscle Female skeletal muscle
46 chr9:115551800-115552600 Weak transcription Brain Angular Gyrus brain
47 chr9:115551800-115552600 Enhancers Stomach Smooth Muscle stomach
48 chr9:115551800-115552800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr9:115551800-115556800 Weak transcription Psoas Muscle Psoas
50 chr9:115552000-115552400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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