Variant report

Variant	rs62637720
Chromosome Location	chr14:106084047-106084048
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10162570	0.80[ASN][1000 genomes]
rs11628683	0.83[ASN][1000 genomes]
rs11850206	0.92[ASN][1000 genomes]
rs4983475	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530813	chr14:105607701-106453697	Strong transcription Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	149 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:106082400-106084200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr14:106082600-106084200	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr14:106082600-106084200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr14:106082600-106084200	ZNF genes & repeats	Pancreas	Pancrea
5	chr14:106082600-106084200	ZNF genes & repeats	Spleen	Spleen
6	chr14:106083200-106084200	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
7	chr14:106083200-106084200	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
8	chr14:106083200-106084200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
9	chr14:106083200-106084200	ZNF genes & repeats	Gastric	stomach
10	chr14:106083400-106084200	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
11	chr14:106083400-106084200	ZNF genes & repeats	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr14:106083400-106084200	ZNF genes & repeats	Esophagus	oesophagus
13	chr14:106083600-106084200	ZNF genes & repeats	Fetal Heart	heart
14	chr14:106083600-106084200	Enhancers	Right Ventricle	heart
15	chr14:106083600-106084200	Bivalent/Poised TSS	Skeletal Muscle Male	skeletal muscle
16	chr14:106083800-106084200	Bivalent Enhancer	Primary B cells from peripheral blood	blood
17	chr14:106084000-106084200	Bivalent Enhancer	Brain Dorsolateral Prefrontal Cortex	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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