The 2.0 version of rSNPBase

Variant report

Variant rs6420943
Chromosome Location chr14:105909337-105909338
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:105887600-105919000 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr14:105888600-105914800 Weak transcription Rectal Smooth Muscle rectum
3 chr14:105888600-105918400 Weak transcription Colon Smooth Muscle Colon
4 chr14:105889200-105939800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr14:105889200-105939800 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr14:105889400-105914400 Weak transcription Brain Hippocampus Middle brain
7 chr14:105889400-105914800 Weak transcription Brain Cingulate Gyrus brain
8 chr14:105889400-105916400 Weak transcription Brain Anterior Caudate brain
9 chr14:105890400-105916200 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr14:105897400-105914800 Weak transcription Right Atrium heart
11 chr14:105897400-105917000 Weak transcription Primary B cells from cord blood blood
12 chr14:105897600-105914600 Weak transcription Fetal Lung lung
13 chr14:105897600-105927200 Weak transcription NH-A brain
14 chr14:105897800-105940000 Weak transcription K562 blood
15 chr14:105898400-105931600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr14:105898400-105939800 Weak transcription NHDF-Ad bronchial
17 chr14:105900000-105915800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr14:105900800-105916400 Weak transcription Primary neutrophils fromperipheralblood blood
19 chr14:105901800-105913400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr14:105902800-105909400 Strong transcription Primary monocytes fromperipheralblood blood
21 chr14:105902800-105909800 Strong transcription Monocytes-CD14+_RO01746 blood
22 chr14:105902800-105911800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr14:105902800-105914600 Strong transcription Fetal Stomach stomach
24 chr14:105902800-105925200 Strong transcription Dnd41 blood
25 chr14:105902800-105937800 Strong transcription Primary hematopoietic stem cells short term culture blood
26 chr14:105903000-105914400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr14:105903200-105909600 Strong transcription HUES48 Cell Line embryonic stem cell
28 chr14:105903200-105909800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr14:105903200-105910000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr14:105903200-105935400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr14:105903400-105909600 Strong transcription NHLF lung
32 chr14:105903400-105909800 Strong transcription iPS-15b Cell Line embryonic stem cell
33 chr14:105903400-105913200 Strong transcription Fetal Intestine Small intestine
34 chr14:105903600-105909600 Strong transcription Primary T cells from cord blood blood
35 chr14:105903800-105909800 Strong transcription Lung lung
36 chr14:105904000-105909800 Strong transcription H1 Cell Line embryonic stem cell
37 chr14:105904000-105913600 Strong transcription Fetal Thymus thymus
38 chr14:105904000-105919000 Weak transcription Hela-S3 cervix
39 chr14:105904400-105939800 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr14:105904600-105910200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr14:105905200-105909600 Strong transcription Fetal Intestine Large intestine
42 chr14:105905200-105909800 Strong transcription HUES6 Cell Line embryonic stem cell
43 chr14:105905200-105909800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr14:105905400-105909800 Strong transcription Primary T regulatory cells fromperipheralblood blood
45 chr14:105905400-105909800 Strong transcription Gastric stomach
46 chr14:105905400-105910000 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr14:105905800-105909800 Strong transcription Primary T cells fromperipheralblood blood
48 chr14:105906200-105910400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr14:105906400-105910000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr14:105906600-105910200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015