The 2.0 version of rSNPBase

Variant report

Variant rs6433091
Chromosome Location chr2:169610427-169610428
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:169565200-169622800 Weak transcription Liver Liver
2 chr2:169577600-169613600 Weak transcription Fetal Kidney kidney
3 chr2:169579600-169630200 Weak transcription Aorta Aorta
4 chr2:169579600-169630600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr2:169580400-169610600 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr2:169580800-169610600 Weak transcription Primary B cells from cord blood blood
7 chr2:169581000-169612000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr2:169583800-169613000 Weak transcription Primary hematopoietic stem cells blood
9 chr2:169586000-169627600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr2:169587800-169623200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr2:169593400-169612400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr2:169594000-169611000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr2:169595000-169610600 Weak transcription HMEC breast
14 chr2:169595200-169621000 Weak transcription Brain Germinal Matrix brain
15 chr2:169595200-169622800 Weak transcription NHEK skin
16 chr2:169597200-169635800 Weak transcription Ovary ovary
17 chr2:169597600-169613600 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr2:169598600-169622800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr2:169601400-169610600 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr2:169601600-169625800 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr2:169604200-169615200 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr2:169604400-169615400 Enhancers Primary T helper cells fromperipheralblood blood
23 chr2:169604600-169615800 Enhancers Primary T helper 17 cells PMA-I stimulated --
24 chr2:169604600-169616000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr2:169604800-169627600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr2:169605000-169611400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
27 chr2:169605200-169612400 Weak transcription Right Ventricle heart
28 chr2:169605600-169615800 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr2:169606000-169611800 Weak transcription Fetal Brain Female brain
30 chr2:169606000-169623000 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr2:169606000-169630600 Weak transcription H1 Cell Line embryonic stem cell
32 chr2:169606000-169630600 Weak transcription Adipose Nuclei Adipose
33 chr2:169606200-169612000 Weak transcription Stomach Smooth Muscle stomach
34 chr2:169606200-169630400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr2:169606600-169630600 Weak transcription Gastric stomach
36 chr2:169606600-169632800 Weak transcription Pancreas Pancrea
37 chr2:169606800-169610800 Weak transcription Fetal Muscle Trunk muscle
38 chr2:169606800-169613200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr2:169607200-169610600 Enhancers Fetal Heart heart
40 chr2:169607800-169613400 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr2:169608000-169610800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr2:169608000-169613000 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr2:169608000-169616000 Enhancers Primary T helper cells PMA-I stimulated --
44 chr2:169608000-169622000 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr2:169608000-169625800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr2:169608200-169611800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr2:169608200-169612800 Weak transcription GM12878-XiMat blood
48 chr2:169608200-169613600 Weak transcription Small Intestine intestine
49 chr2:169608200-169615200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
50 chr2:169608200-169615800 Enhancers Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015