The 2.0 version of rSNPBase

Variant report

Variant rs3843327
Chromosome Location chr2:169607602-169607603
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:169565200-169622800 Weak transcription Liver Liver
2 chr2:169577600-169613600 Weak transcription Fetal Kidney kidney
3 chr2:169579600-169610400 Weak transcription HepG2 liver
4 chr2:169579600-169630200 Weak transcription Aorta Aorta
5 chr2:169579600-169630600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:169580400-169610600 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr2:169580800-169610600 Weak transcription Primary B cells from cord blood blood
8 chr2:169581000-169612000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr2:169581600-169610400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr2:169583800-169613000 Weak transcription Primary hematopoietic stem cells blood
11 chr2:169586000-169627600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:169587800-169623200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr2:169593400-169612400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr2:169594000-169611000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr2:169595000-169608400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr2:169595000-169610600 Weak transcription HMEC breast
17 chr2:169595200-169621000 Weak transcription Brain Germinal Matrix brain
18 chr2:169595200-169622800 Weak transcription NHEK skin
19 chr2:169597200-169608600 Weak transcription Primary monocytes fromperipheralblood blood
20 chr2:169597200-169635800 Weak transcription Ovary ovary
21 chr2:169597600-169613600 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr2:169598600-169622800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr2:169601400-169610600 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr2:169601600-169625800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr2:169602600-169609000 Weak transcription Lung lung
26 chr2:169602800-169610400 Weak transcription Duodenum Mucosa Duodenum
27 chr2:169603200-169608200 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr2:169603800-169608000 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr2:169604200-169615200 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr2:169604400-169615400 Enhancers Primary T helper cells fromperipheralblood blood
31 chr2:169604600-169609200 Enhancers Fetal Muscle Leg muscle
32 chr2:169604600-169615800 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr2:169604600-169616000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr2:169604800-169627600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr2:169605000-169611400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
36 chr2:169605200-169608000 Weak transcription Brain Angular Gyrus brain
37 chr2:169605200-169609400 Enhancers Primary T regulatory cells fromperipheralblood blood
38 chr2:169605200-169612400 Weak transcription Right Ventricle heart
39 chr2:169605400-169607800 Enhancers Primary T killer memory cells from peripheral blood blood
40 chr2:169605600-169615800 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr2:169605800-169610400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr2:169606000-169611800 Weak transcription Fetal Brain Female brain
43 chr2:169606000-169623000 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr2:169606000-169630600 Weak transcription H1 Cell Line embryonic stem cell
45 chr2:169606000-169630600 Weak transcription Adipose Nuclei Adipose
46 chr2:169606200-169612000 Weak transcription Stomach Smooth Muscle stomach
47 chr2:169606200-169630400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr2:169606400-169608800 Enhancers Fetal Intestine Small intestine
49 chr2:169606600-169607800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr2:169606600-169607800 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015