Variant report

Variant	rs6459015
Chromosome Location	chr6:54461443-54461444
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10484982	0.84[EUR][1000 genomes]
rs10484983	0.84[EUR][1000 genomes]
rs10948828	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16885517	0.83[EUR][1000 genomes]
rs16885549	0.84[EUR][1000 genomes]
rs16885553	0.84[EUR][1000 genomes]
rs16885557	0.84[EUR][1000 genomes]
rs16885559	0.84[EUR][1000 genomes]
rs6909601	0.83[EUR][1000 genomes]
rs6918025	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73742133	0.83[EUR][1000 genomes]
rs7755519	0.80[AMR][1000 genomes]
rs9464100	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427757	chr6:54296552-54507210	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54460200-54461600	Enhancers	Osteobl	bone

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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