Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT3	chr6:50018249-50018415	MCF10A-Er-Src	breast:	n/a	n/a

Variant related genes	Relation type
DEFB112	TF binding region

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1238738	1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17736782	1.00[JPT][hapmap]
rs17736830	1.00[JPT][hapmap]
rs2147408	1.00[JPT][hapmap]
rs2147411	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs612591	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs639496	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs643279	1.00[JPT][hapmap]
rs646158	1.00[JPT][hapmap];0.92[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs650691	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs666547	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs671718	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs673551	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs677601	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73739904	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73739916	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73739917	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs73739929	1.00[ASN][1000 genomes]
rs73739930	1.00[ASN][1000 genomes]
rs9296624	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9463559	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9473701	1.00[JPT][hapmap]

No data

Chromatin state (count:0 , 50 per page) page:

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