Variant report

Variant rs6477084
Chromosome Location chr9:654147-654148
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:616800-655800 Weak transcription Pancreas Pancrea
2 chr9:650000-656000 Weak transcription Spleen Spleen
3 chr9:650600-655400 Weak transcription Psoas Muscle Psoas
4 chr9:650600-655400 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr9:650600-655800 Weak transcription Fetal Lung lung
6 chr9:650800-655400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr9:650800-655600 Weak transcription Liver Liver
8 chr9:650800-655800 Weak transcription Aorta Aorta
9 chr9:650800-655800 Weak transcription NHLF lung
10 chr9:650800-656000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr9:650800-656000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr9:650800-656000 Weak transcription Muscle Satellite Cultured Cells --
13 chr9:650800-656000 Weak transcription Esophagus oesophagus
14 chr9:650800-656000 Weak transcription Lung lung
15 chr9:650800-668000 Weak transcription Fetal Intestine Small intestine
16 chr9:650800-670400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr9:651000-655400 Weak transcription Stomach Smooth Muscle stomach
18 chr9:651000-655400 Weak transcription NHEK skin
19 chr9:651200-660600 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr9:651600-655400 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr9:651600-655600 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr9:651600-655800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr9:651600-657200 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr9:651800-654800 Weak transcription H1 Cell Line embryonic stem cell
25 chr9:652800-654400 Enhancers Brain Inferior Temporal Lobe brain
26 chr9:652800-654400 Enhancers Colon Smooth Muscle Colon
27 chr9:652800-654400 Enhancers Skeletal Muscle Female skeletal muscle
28 chr9:652800-654400 Enhancers Dnd41 blood
29 chr9:652800-655200 Enhancers Primary B cells from peripheral blood blood
30 chr9:652800-655200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr9:652800-655200 Enhancers Brain Hippocampus Middle brain
32 chr9:652800-655400 Enhancers Primary monocytes fromperipheralblood blood
33 chr9:652800-655400 Enhancers Primary hematopoietic stem cells blood
34 chr9:652800-655400 Enhancers Monocytes-CD14+_RO01746 blood
35 chr9:652800-657800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr9:652800-658000 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr9:652800-658400 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr9:653000-654200 Enhancers Brain Substantia Nigra brain
39 chr9:653000-654200 Enhancers Right Ventricle heart
40 chr9:653000-654200 Enhancers GM12878-XiMat blood
41 chr9:653000-654400 Enhancers Rectal Smooth Muscle rectum
42 chr9:653000-654800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr9:653000-654800 Enhancers Brain Anterior Caudate brain
44 chr9:653000-658400 Enhancers Fetal Heart heart
45 chr9:653200-654200 Enhancers Thymus Thymus
46 chr9:653200-654400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr9:653200-654600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr9:653200-656000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr9:653400-654200 Flanking Active TSS Adipose Nuclei Adipose
50 chr9:653400-654400 Enhancers Brain Cingulate Gyrus brain

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