Variant report

Variant	rs6482205
Chromosome Location	chr10:22507452-22507453
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:5)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:22504057..22509886-chr10:22511644..22520139,13	K562	blood:
2	chr10:22299905..22300468-chr10:22507164..22508045,2	MCF-7	breast:
3	chr10:22392525..22393206-chr10:22507186..22508102,2	MCF-7	breast:
4	chr10:22507273..22510143-chr10:22608141..22611763,3	MCF-7	breast:
5	chr10:22496420..22499668-chr10:22505948..22508312,3	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-COMMD3-2	chr10:22507003-22510097	ENSG00000260205.1

No data

No data

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10159630	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10159673	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10159675	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10160187	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11012892	0.81[AFR][1000 genomes]
rs11812422	1.00[ASN][1000 genomes]
rs12253729	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12264839	1.00[ASN][1000 genomes]
rs12268709	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1327691	1.00[ASN][1000 genomes]
rs55654426	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56911002	1.00[ASN][1000 genomes]
rs57796255	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59961880	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73596579	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs74121390	1.00[ASN][1000 genomes]
rs74121391	1.00[ASN][1000 genomes]
rs7905885	1.00[ASN][1000 genomes]
rs7915647	1.00[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22506800-22509000	Enhancers	K562	blood
2	chr10:22507400-22507600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr10:22507400-22507800	Enhancers	Brain Substantia Nigra	brain
4	chr10:22507400-22508200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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