Variant report

Variant	rs74121390
Chromosome Location	chr10:22516776-22516777
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:24)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:24 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:22516379..22519829-chr10:22612208..22615485,5	K562	blood:
2	chr10:22516717..22521891-chr10:22603838..22606861,9	MCF-7	breast:
3	chr10:22277614..22280212-chr10:22516665..22519232,2	K562	blood:
4	chr10:22501957..22503569-chr10:22515649..22517385,3	K562	blood:
5	chr10:21813686..21815878-chr10:22516741..22518874,2	K562	blood:
6	chr10:22516593..22520023-chr10:22553970..22557521,4	K562	blood:
7	chr10:22510185..22512570-chr10:22516550..22518127,2	K562	blood:
8	chr10:22512809..22515175-chr10:22515967..22519351,5	K562	blood:
9	chr10:22401743..22403335-chr10:22516573..22518309,2	K562	blood:
10	chr10:22516740..22521586-chr10:22593364..22598142,7	K562	blood:
11	chr10:22516462..22518622-chr10:22629228..22630797,3	K562	blood:
12	chr10:22516684..22518584-chr8:145687803..145690446,2	MCF-7	breast:
13	chr10:22515718..22519834-chr10:22608311..22611140,7	K562	blood:
14	chr10:22516724..22519757-chr10:22535657..22538492,3	MCF-7	breast:
15	chr10:22515899..22517554-chr10:23343051..23344773,2	K562	blood:
16	chr10:22290913..22292792-chr10:22516713..22520895,4	MCF-7	breast:
17	chr10:22513263..22515175-chr10:22515967..22518190,3	K562	blood:
18	chr10:22516126..22520099-chr10:22602688..22606779,6	K562	blood:
19	chr10:22290370..22294143-chr10:22516445..22519951,6	K562	blood:
20	chr10:22516379..22519829-chr10:22613131..22615551,4	K562	blood:
21	chr10:22515271..22520574-chr10:22601891..22607143,12	K562	blood:
22	chr10:22277324..22279114-chr10:22516665..22518319,2	K562	blood:
23	chr10:22504057..22509886-chr10:22511644..22520139,13	K562	blood:
24	chr10:22290370..22292926-chr10:22516445..22519930,5	K562	blood:

No data

Variant related genes	Relation type
ENSG00000227462	Chromatin interaction
ENSG00000136770	Chromatin interaction
ENSG00000187954	Chromatin interaction
ENSG00000233318	Chromatin interaction
ENSG00000272366	Chromatin interaction
ENSG00000168283	Chromatin interaction
ENSG00000254578	Chromatin interaction
ENSG00000148444	Chromatin interaction
ENSG00000269897	Chromatin interaction
ENSG00000180592	Chromatin interaction
ENSG00000260205	Chromatin interaction

rs_ID	r²[population]
rs10159630	1.00[ASN][1000 genomes]
rs10159673	1.00[ASN][1000 genomes]
rs10159675	1.00[ASN][1000 genomes]
rs10160187	1.00[ASN][1000 genomes]
rs11812422	1.00[ASN][1000 genomes]
rs12253729	1.00[ASN][1000 genomes]
rs12264839	1.00[ASN][1000 genomes]
rs12268709	1.00[ASN][1000 genomes]
rs1327691	1.00[ASN][1000 genomes]
rs56911002	1.00[ASN][1000 genomes]
rs57796255	1.00[ASN][1000 genomes]
rs59961880	1.00[ASN][1000 genomes]
rs6482205	1.00[ASN][1000 genomes]
rs73596579	1.00[ASN][1000 genomes]
rs74121391	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7905885	1.00[ASN][1000 genomes]
rs7915647	1.00[ASN][1000 genomes]

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22508600-22517800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr10:22515400-22517400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr10:22515800-22517000	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr10:22516400-22517000	Enhancers	K562	blood
5	chr10:22516400-22517600	Enhancers	Right Atrium	heart
6	chr10:22516600-22518000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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