Variant report

Variant	rs12264839
Chromosome Location	chr10:22531203-22531204
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:22291289..22293378-chr10:22529741..22532274,2	MCF-7	breast:
2	chr10:22528332..22532330-chr10:22533041..22536116,4	K562	blood:

Variant related genes	Relation type
ENSG00000136770	Chromatin interaction

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10159630	1.00[ASN][1000 genomes]
rs10159673	1.00[ASN][1000 genomes]
rs10159675	1.00[ASN][1000 genomes]
rs10160187	1.00[ASN][1000 genomes]
rs10466081	0.88[EUR][1000 genomes]
rs10508640	1.00[TSI][hapmap]
rs10508642	0.88[EUR][1000 genomes]
rs11012890	0.88[EUR][1000 genomes]
rs11012892	0.88[EUR][1000 genomes]
rs11012893	0.94[EUR][1000 genomes]
rs11012894	0.85[TSI][hapmap];0.88[EUR][1000 genomes]
rs11812422	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12250660	0.80[YRI][hapmap];0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12253729	1.00[ASN][1000 genomes]
rs12257323	1.00[TSI][hapmap];0.88[EUR][1000 genomes]
rs12257355	0.88[EUR][1000 genomes]
rs12262200	0.94[EUR][1000 genomes]
rs12268709	1.00[ASN][1000 genomes]
rs1327691	1.00[ASN][1000 genomes]
rs56911002	1.00[ASN][1000 genomes]
rs57066906	0.88[EUR][1000 genomes]
rs57562594	0.88[EUR][1000 genomes]
rs57796255	1.00[ASN][1000 genomes]
rs59961880	1.00[ASN][1000 genomes]
rs6482205	1.00[ASN][1000 genomes]
rs73596576	0.88[EUR][1000 genomes]
rs73596577	0.88[EUR][1000 genomes]
rs73596578	0.88[EUR][1000 genomes]
rs73596579	1.00[ASN][1000 genomes]
rs74121381	0.94[EUR][1000 genomes]
rs74121390	1.00[ASN][1000 genomes]
rs74121391	1.00[ASN][1000 genomes]
rs7894862	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7900749	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7905885	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7915647	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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