Variant report
| Variant | rs12250660 |
|---|---|
| Chromosome Location | chr10:22531317-22531318 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000136770 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:23)
| rs_ID | r2[population] |
|---|---|
| rs10466081 | 1.00[EUR][1000 genomes] |
| rs10508642 | 1.00[EUR][1000 genomes] |
| rs11012890 | 1.00[EUR][1000 genomes] |
| rs11012892 | 1.00[EUR][1000 genomes] |
| rs11012893 | 0.94[EUR][1000 genomes] |
| rs11012894 | 1.00[EUR][1000 genomes] |
| rs11812422 | 0.90[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs12257323 | 1.00[EUR][1000 genomes] |
| rs12257355 | 1.00[EUR][1000 genomes] |
| rs12262200 | 0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12264839 | 0.80[YRI][hapmap];0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs16922112 | 0.89[EUR][1000 genomes] |
| rs56158165 | 0.88[EUR][1000 genomes] |
| rs57066906 | 1.00[EUR][1000 genomes] |
| rs57562594 | 1.00[EUR][1000 genomes] |
| rs73596576 | 1.00[EUR][1000 genomes] |
| rs73596577 | 1.00[EUR][1000 genomes] |
| rs73596578 | 1.00[EUR][1000 genomes] |
| rs74121381 | 0.94[EUR][1000 genomes] |
| rs7894862 | 0.90[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs7900749 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7905885 | 0.90[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs7915647 | 0.90[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
