Variant report
| Variant | rs10466081 |
|---|---|
| Chromosome Location | chr10:22498450-22498451 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:22496420..22499668-chr10:22505948..22508312,3 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000260205 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:29)
| rs_ID | r2[population] |
|---|---|
| rs10508640 | 1.00[CHB][hapmap] |
| rs10508642 | 1.00[CHB][hapmap];1.00[EUR][1000 genomes] |
| rs11012890 | 1.00[CHB][hapmap];1.00[EUR][1000 genomes] |
| rs11012892 | 1.00[CHB][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs11012893 | 0.94[EUR][1000 genomes] |
| rs11012894 | 1.00[CHB][hapmap];1.00[EUR][1000 genomes] |
| rs11812422 | 0.94[EUR][1000 genomes] |
| rs12250660 | 1.00[EUR][1000 genomes] |
| rs12257323 | 1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12257355 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12262200 | 0.94[EUR][1000 genomes] |
| rs12263070 | 1.00[CHB][hapmap] |
| rs12264839 | 0.88[EUR][1000 genomes] |
| rs16922008 | 1.00[CHB][hapmap] |
| rs16922014 | 1.00[CHB][hapmap] |
| rs16922112 | 1.00[CHB][hapmap];0.89[EUR][1000 genomes] |
| rs56158165 | 0.88[EUR][1000 genomes] |
| rs57066906 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs57562594 | 1.00[EUR][1000 genomes] |
| rs7090197 | 1.00[CHB][hapmap] |
| rs7095916 | 1.00[CHB][hapmap] |
| rs73596576 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73596577 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73596578 | 1.00[EUR][1000 genomes] |
| rs74121381 | 0.94[EUR][1000 genomes] |
| rs7894862 | 0.94[EUR][1000 genomes] |
| rs7900749 | 0.94[EUR][1000 genomes] |
| rs7905885 | 0.94[EUR][1000 genomes] |
| rs7915647 | 0.88[EUR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
