Variant report

No.	Distal block	Cell Line	Cell type
1	chr10:22392202..22394692-chr10:22609126..22611817,2	MCF-7	breast:
2	chr10:22393820..22395518-chr10:22421627..22424480,2	K562	blood:
3	chr10:22393772..22396494-chr10:22400221..22401954,2	MCF-7	breast:
4	chr10:22291123..22293535-chr10:22390579..22394203,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000136770	Chromatin interaction
ENSG00000168283	Chromatin interaction

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10466081	1.00[CHB][hapmap]
rs10508640	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs10508642	1.00[CHB][hapmap]
rs11012890	1.00[CHB][hapmap]
rs11012892	1.00[CHB][hapmap]
rs11012894	1.00[CHB][hapmap]
rs12248406	1.00[ASN][1000 genomes]
rs12262626	1.00[ASN][1000 genomes]
rs12263070	0.94[ASW][hapmap];1.00[CHB][hapmap];0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16921947	0.89[EUR][1000 genomes]
rs16922008	1.00[CHB][hapmap];0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16922112	1.00[CHB][hapmap]
rs56027722	0.87[EUR][1000 genomes]
rs56162327	0.87[EUR][1000 genomes]
rs56323200	0.87[EUR][1000 genomes]
rs61454417	0.89[EUR][1000 genomes]
rs66867344	0.89[EUR][1000 genomes]
rs7069565	0.89[EUR][1000 genomes]
rs7090197	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs7095916	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs72810771	0.87[EUR][1000 genomes]
rs72810772	0.87[EUR][1000 genomes]
rs72810773	0.87[EUR][1000 genomes]
rs72812739	0.87[EUR][1000 genomes]
rs74122772	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv971872	chr10:22386395-22398112	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22393800-22398600	Weak transcription	Fetal Stomach	stomach

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