Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:58479445..58483146-chr15:58484303..58486814,3	K562	blood:
2	chr15:58481646..58483822-chr15:58485314..58486838,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1001619	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10851634	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11071369	0.80[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs11854297	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1663247	0.84[AFR][1000 genomes]
rs1663248	0.96[ASN][1000 genomes]
rs1711053	0.81[AFR][1000 genomes]
rs1711055	0.84[AFR][1000 genomes]
rs1711057	0.95[EUR][1000 genomes]
rs1867380	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1992587	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2077735	0.86[ASN][1000 genomes]
rs2249783	0.92[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs2292712	0.81[EUR][1000 genomes]
rs2414548	0.81[AFR][1000 genomes]
rs3784252	0.84[AFR][1000 genomes]
rs3858889	0.93[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs3858890	0.95[EUR][1000 genomes]
rs4775017	0.84[AFR][1000 genomes]
rs4775018	0.92[EUR][1000 genomes]
rs6493985	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs717868	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7496568	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs8035209	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs935208	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047246	chr15:58375607-58707158	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv833024	chr15:58447459-58621963	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	esv2752813	chr15:58461006-58507064	Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv1050473	chr15:58479888-58562270	Active TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:58481600-58485800	Weak transcription	K562	blood
2	chr15:58485600-58486200	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr15:58485600-58486200	Bivalent/Poised TSS	A549	lung

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