Variant report

Variant	rs6509035
Chromosome Location	chr19:43361632-43361633
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr19:43361560-43361710	AG04449	skin:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361617-43361627 chr19:43361615-43361631
2	MYC	chr19:43361548-43361766	MCF10A-Er-Src	breast:	n/a	n/a
3	SPI1	chr19:43361504-43361686	K562	blood:	n/a	n/a
4	CTCF	chr19:43361440-43361757	K562	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
5	RAD21	chr19:43361318-43361827	HCT-116	colon:	n/a	chr19:43361618-43361627 chr19:43361452-43361461 chr19:43361612-43361631
6	CTCF	chr19:43361343-43361764	MCF-7	breast:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
7	CTCF	chr19:43361488-43361744	GM19240	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
8	CTCF	chr19:43361472-43361781	GM13977	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
9	CTCF	chr19:43361278-43361786	K562	blood:	n/a	chr19:43361316-43361334 chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
10	CTCF	chr19:43361291-43361921	A549	lung:	n/a	chr19:43361316-43361334 chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
11	CTCF	chr19:43361565-43361699	Kidney_OC	kidney:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361617-43361627 chr19:43361615-43361631
12	FOSL2	chr19:43361413-43361765	HepG2	liver:	n/a	n/a
13	CTCF	chr19:43361248-43361913	K562	blood:	n/a	chr19:43361316-43361334 chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
14	CTCF	chr19:43361460-43361750	GM12875	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
15	RAD21	chr19:43361440-43361692	HepG2	liver:	n/a	chr19:43361618-43361627 chr19:43361452-43361461 chr19:43361612-43361631
16	CTCF	chr19:43361485-43361758	GM12892	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
17	CTCF	chr19:43361500-43361650	BE2_C	brain:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361617-43361627 chr19:43361615-43361631
18	CTCF	chr19:43361520-43361725	Pancreas_OC	pancreas:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
19	CTCF	chr19:43361537-43361738	GM10266	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
20	RAD21	chr19:43361439-43361707	SK-N-SH_RA	brain:	n/a	chr19:43361618-43361627 chr19:43361452-43361461 chr19:43361612-43361631
21	CTCF	chr19:43361562-43361726	Spleen_OC	spleen:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
22	CTCF	chr19:43361324-43361789	NHEK	skin:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
23	RAD21	chr19:43361437-43361725	H1-hESC	embryonic stem cell:	n/a	chr19:43361618-43361627 chr19:43361452-43361461 chr19:43361612-43361631
24	BATF	chr19:43361555-43361754	GM12878	blood:	n/a	n/a
25	CTCF	chr19:43361552-43361724	HepG2	liver:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
26	RAD21	chr19:43361534-43361710	H1-hESC	embryonic stem cell:	n/a	chr19:43361618-43361627 chr19:43361612-43361631
27	ZNF143	chr19:43361531-43361732	GM12878	blood:	n/a	n/a
28	CTCF	chr19:43361243-43361991	HCT-116	colon:	n/a	chr19:43361316-43361334 chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
29	CTCF	chr19:43361535-43361735	ProgFib	skin:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
30	CTCF	chr19:43361580-43361730	AG10803	skin:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
31	SMC3	chr19:43361239-43361864	SK-N-SH	brain:	n/a	chr19:43361452-43361459 chr19:43361616-43361630
32	CTCF	chr19:43361501-43361747	GM12878	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
33	EBF1	chr19:43361468-43361751	GM12878	blood:	n/a	n/a
34	IRF4	chr19:43361428-43361796	GM12878	blood:	n/a	n/a
35	CTCF	chr19:43361620-43361770	GM12870	blood:	n/a	chr19:43361620-43361629 chr19:43361706-43361713
36	CTCF	chr19:43361387-43361766	MCF-7	breast:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
37	CTCF	chr19:43360958-43362087	A549	lung:	n/a	chr19:43361316-43361334 chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
38	SMC3	chr19:43361440-43361734	Hela-S3	cervix:	n/a	chr19:43361452-43361459 chr19:43361616-43361630
39	CTCF	chr19:43361312-43361766	HepG2	liver:	n/a	chr19:43361316-43361334 chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
40	CTCF	chr19:43361476-43361789	Medullo	brain:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
41	IRF4	chr19:43361422-43361837	GM12878	blood:	n/a	n/a
42	CTCF	chr19:43361500-43361650	MCF-7	breast:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361617-43361627 chr19:43361615-43361631
43	CTCF	chr19:43361505-43361680	SK-N-SH_RA	brain:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361617-43361627 chr19:43361615-43361631
44	SP1	chr19:43361449-43361804	GM12878	blood:	n/a	n/a
45	CTCF	chr19:43361600-43361750	Caco-2	colon:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
46	CTCF	chr19:43361539-43361724	Fibrobl	skin:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
47	CTCF	chr19:43361600-43361750	SK-N-SH_RA	brain:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361706-43361713 chr19:43361617-43361627 chr19:43361615-43361631
48	RAD21	chr19:43361316-43361999	A549	lung:	n/a	chr19:43361881-43361891 chr19:43361618-43361627 chr19:43361452-43361461 chr19:43361612-43361631 chr19:43361317-43361336
49	CTCF	chr19:43361571-43361704	GM20000	blood:	n/a	chr19:43361609-43361630 chr19:43361614-43361632 chr19:43361620-43361629 chr19:43361617-43361627 chr19:43361615-43361631
50	FOXP2	chr19:43361546-43361747	PFSK-1	brain:	n/a	n/a

Variant related genes	Relation type
PSG10P	TF binding region
PSG8	TF binding region

Extended variants
information (count: 580 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:93)

rs_ID	r²[population]
rs10084120	0.81[EUR][1000 genomes]
rs10084121	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10084124	1.00[ASN][1000 genomes]
rs10408339	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10469289	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10469290	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1058933	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11083680	1.00[JPT][hapmap]
rs12459659	1.00[JPT][hapmap]
rs13346998	0.81[EUR][1000 genomes]
rs17344759	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17654693	1.00[JPT][hapmap];0.80[YRI][hapmap];1.00[ASN][1000 genomes]
rs2041105	0.87[EUR][1000 genomes]
rs2041106	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2353131	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.81[EUR][1000 genomes]
rs2353132	1.00[ASN][1000 genomes]
rs3859465	0.87[EUR][1000 genomes]
rs4078622	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41448149	0.81[EUR][1000 genomes]
rs4399650	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4427920	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4558510	1.00[ASN][1000 genomes]
rs56711402	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56947971	0.82[EUR][1000 genomes]
rs57161682	1.00[ASN][1000 genomes]
rs57515613	1.00[ASN][1000 genomes]
rs57663243	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57750415	1.00[ASN][1000 genomes]
rs57760398	1.00[ASN][1000 genomes]
rs57760445	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57975345	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58089469	0.87[EUR][1000 genomes]
rs58309502	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58370549	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58462634	0.90[AFR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58580096	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58684857	0.87[EUR][1000 genomes]
rs58738566	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58900239	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58949549	0.87[EUR][1000 genomes]
rs59007873	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59123116	0.82[EUR][1000 genomes]
rs59457585	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59495407	1.00[ASN][1000 genomes]
rs60116510	1.00[ASN][1000 genomes]
rs60189774	0.84[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs60228619	0.82[EUR][1000 genomes]
rs60236304	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60284544	0.91[EUR][1000 genomes]
rs60347971	0.86[EUR][1000 genomes]
rs60808133	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60887906	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60911559	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61209097	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61234580	0.87[EUR][1000 genomes]
rs61423170	0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61433961	0.80[EUR][1000 genomes]
rs61437651	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61525132	1.00[ASN][1000 genomes]
rs6509031	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6509032	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6509052	1.00[JPT][hapmap]
rs6509053	1.00[JPT][hapmap]
rs7248094	1.00[ASN][1000 genomes]
rs7248182	0.90[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7248225	0.93[CEU][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes]
rs7248471	0.86[EUR][1000 genomes]
rs7249132	0.89[EUR][1000 genomes]
rs7251298	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7251722	0.90[AFR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7252225	1.00[ASN][1000 genomes]
rs7255423	1.00[JPT][hapmap]
rs7257768	1.00[JPT][hapmap]
rs7257922	1.00[JPT][hapmap];0.87[EUR][1000 genomes]
rs7258716	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7258821	0.87[EUR][1000 genomes]
rs7259540	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7260479	0.92[CEU][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes]
rs73553545	0.87[EUR][1000 genomes]
rs73553550	0.87[EUR][1000 genomes]
rs73553569	1.00[ASN][1000 genomes]
rs7507381	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8100533	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8100731	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8101282	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8101498	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8101818	0.82[EUR][1000 genomes]
rs8103674	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8106910	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8110253	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8110412	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8113203	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9941479	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:487 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422471	chr19:42733141-43669485	Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	70 gene(s)	inside rSNPs	diseases
2	esv2422468	chr19:42991289-43669027	Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
3	esv2758501	chr19:43042747-43899053	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
4	esv2758763	chr19:43042747-43899053	Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
5	nsv428023	chr19:43042747-43899053	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
6	esv2422227	chr19:43059426-43669485	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
7	nsv1056270	chr19:43139043-43542819	Enhancers Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
8	nsv544007	chr19:43141984-43529861	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
9	nsv1061798	chr19:43141984-43741311	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
10	nsv544008	chr19:43141984-43741311	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
11	esv2754239	chr19:43145417-43559330	Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
12	esv1845826	chr19:43152829-43454902	Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
13	esv2757697	chr19:43164418-43870887	Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
14	nsv1055872	chr19:43173614-44075193	Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
15	nsv544009	chr19:43173614-44075193	Enhancers ZNF genes & repeats Genic enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
16	nsv544010	chr19:43173814-43584478	Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
17	nsv544011	chr19:43173814-43741311	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
18	esv2751786	chr19:43198035-43685930	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
19	nsv516973	chr19:43202770-43866823	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
20	nsv869916	chr19:43203105-43584433	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
21	nsv869571	chr19:43203105-43802656	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
22	nsv869565	chr19:43203105-43810421	Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
23	nsv963056	chr19:43203249-43798708	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
24	nsv9730	chr19:43203459-43802656	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
25	esv1812820	chr19:43203937-43803388	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
26	esv1808074	chr19:43214215-43805847	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
27	esv1813803	chr19:43214415-43805651	Active TSS ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
28	esv2763121	chr19:43215328-43846394	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
29	nsv833835	chr19:43220207-43423373	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
30	nsv428364	chr19:43220207-43435444	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
31	nsv1056871	chr19:43224550-43361690	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
32	nsv1055747	chr19:43224550-43362640	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
33	nsv1065465	chr19:43224550-43368923	Enhancers Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
34	nsv1055726	chr19:43224550-43370644	Active TSS ZNF genes & repeats Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
35	esv1846846	chr19:43225921-43774853	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
36	esv1805299	chr19:43227458-43790318	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
37	nsv1064932	chr19:43228125-43362640	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
38	nsv1059355	chr19:43228125-43370644	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
39	nsv1060654	chr19:43228125-43451808	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
40	nsv911809	chr19:43233048-43374601	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
41	nsv911810	chr19:43233048-43629573	Enhancers Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
42	esv2760524	chr19:43237611-43805328	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
43	nsv1063131	chr19:43237764-43362640	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
44	nsv1055408	chr19:43237764-43377275	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
45	nsv1061598	chr19:43237764-43415712	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
46	esv34661	chr19:43240379-43673190	Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
47	esv2751787	chr19:43240379-43685930	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
48	esv2751788	chr19:43240379-43711592	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
49	nsv432049	chr19:43240379-43711592	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
50	esv2751789	chr19:43240379-43731159	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:43357600-43361800	Weak transcription	A549	lung
2	chr19:43357600-43378800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr19:43358200-43361800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr19:43359800-43362000	Enhancers	Placenta	Placenta
5	chr19:43360000-43362000	Enhancers	Brain Inferior Temporal Lobe	brain
6	chr19:43360200-43362000	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr19:43361400-43361800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr19:43361400-43362000	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr19:43361400-43362000	Enhancers	Brain Substantia Nigra	brain
10	chr19:43361600-43361800	Enhancers	Spleen	Spleen
11	chr19:43361600-43362000	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr19:43361600-43362000	Enhancers	NHEK	skin

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