Variant report

Variant	rs6536908
Chromosome Location	chr4:166277277-166277278
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11940090	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12506365	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs13106028	1.00[ASN][1000 genomes]
rs13137171	1.00[ASN][1000 genomes]
rs4690813	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4691187	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6536907	1.00[ASN][1000 genomes]
rs6842704	1.00[ASN][1000 genomes]
rs7671176	1.00[ASN][1000 genomes]
rs7677572	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7696111	0.82[ASN][1000 genomes]
rs934814	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1847399	chr4:166259587-166284836	Strong transcription Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Active TSS	TF binding region Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166263200-166280400	Weak transcription	Adipose Nuclei	Adipose
2	chr4:166276600-166277600	Enhancers	HepG2	liver
3	chr4:166276800-166277400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr4:166276800-166277400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr4:166277000-166277400	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr4:166277000-166277800	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr4:166277200-166277400	Enhancers	Primary B cells from peripheral blood	blood
8	chr4:166277200-166277400	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr4:166277200-166277400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr4:166277200-166277800	Enhancers	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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